Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3712 ATGAAGGAGTTGTCTTTTGCAATCATGGAGCTTTTGGCCATTAGTCTTGGCCTTGATCGTTTGTATTTTAAGACATTTTTTGAAGATGGTGAGTCAATAATGAGGTGCAACTCTTACCCTCCTTGCAACAACTCAAGCCTCACACTTGGTACCGGTCCGCACAGTGATCCAACTTCATTGACTGTTCTTCATCAAGACCAAGTTGGTGGCTTAGAAGTTTATCTTGATAACAAATGGTTTGCTGTTCGACCAAGACCTGATGCATTTGTCATTAATATTGGTGACACTTTTATGGCATTGTCAAATGGGAAATACAAGAGTTGTCTACACAGGGCATTGGTAAACAGGGAGGTGGAGAGGAAGTCATTGGTTTATTTTGTGAACCCAAAAGAAGACAAAACAGTGAAACCAACAAAAAAGCTATGTAGCAGCGATGAAGAAAGGAAGTACCCAGATTTCACATGGTCTGATTTGTATGAATTCACACAAAAACATTATAGAGCTGATGTCTCGACTCTCCAAGGTTTCATCCCATGGTTCATTGCCGGCAAGCCTTCTAATTACTAG 567 0.4056 MKELSFAIMELLAISLGLDRLYFKTFFEDGESIMRCNSYPPCNNSSLTLGTGPHSDPTSLTVLHQDQVGGLEVYLDNKWFAVRPRPDAFVINIGDTFMALSNGKYKSCLHRALVNREVERKSLVYFVNPKEDKTVKPTKKLCSSDEERKYPDFTWSDLYEFTQKHYRADVSTLQGFIPWFIAGKPSNY* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3712 188 SUPERFAMILY Clavaminate synthase-like 1 169 - -
Amo13g3712 188 Gene3D - 1 161 IPR027443 -
Amo13g3712 188 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 1 183 - -
Amo13g3712 188 PANTHER GIBBERELLIN 20 OXIDASE 1-B-LIKE 1 183 - -
Amo13g3712 188 Pfam 2OG-Fe(II) oxygenase superfamily 31 129 IPR044861 -
Amo13g3712 188 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 29 129 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3712 Amo-Chr13 125500079 125502344 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3712 8 167 Glycosyltransferase AT5G59530 37.423 5.51e-27 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3712 K05282 - lja:Lj0g3v0207669.1 308.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3712 13 125500079 125502344 Amo13g3712 13 125500079 125502344 ECH