Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3709 ATGGCTCAAGCAAGATATACTAGAATAGACAATAATAAAAAGTCATCGTCCAGTTTCTGCTCGACAGTGACAATTGTTGTGTTTGTGGCTCTATGTCTGGTTGGGGTATGGATGATGACATCCTCCTCTGTAGTTCCTGCACAAAATGCCGATGTTACACAGGACAACAAGACCGATGCTGCTCAGGACAGCACGATTGACATGAAAGAAGCACAGAGTGACACGAAAGAACAGGTGACTGACAACAACAATAGTGGCAACACTCCGAAGTTTGAAGACAATCAGGGTGATCTTCCTGAGGATGCAACCAAGGGGGACACAAATGTCACCTCAGAAAACAACTCTGACGTGAAAGAAAACCAGGAAGAAAAATCAGAGGACAAGTCTGAAGAAAAGTCTTCTAAAGAATCTAAAACAGAAGATGGAGACAAGAAAACAGAGGACAAAGATTCCCCCACAGAAAGTACTGAATCAAACTCACAAACTACAGAAAACAAGGATAGTGGTGAAACTGAGAAACCTGGTTCTGGTGATAGTGAGAAGAAATCTGAATCTGATGAGAGCGATACAAAATCTGAATCGAATGAAAATAAGCAATCTGATTCAGATGAAAGTGCAAATAAATCTGATTCAGATGGAAGTGAAAAGAAATCTGATGACTCAAGTGAAACAACTGATAACAAGACAGAAGATAAGGTGCAACAAAGTGATAAAGAATCAGATGTAAGCTCCAATGAGAAGGAAACAGATGACAGTGCCAACAAGCAGACTTCAACTGAAGTATACGCTTCTGGGGCCCAGTCAGAGCTTCTGAATGAAAATACCACTCAGAATGGGTCTTTTTCAACTCAGGCAGCAGAGTCGAAGAATGAAAAGGAGTCACAAGCATCCTCCAAGCAATCCACTGTGTACAACTGGAAATTATGCAATTCCACTGCTGGCCCTGACTACATCCCATGCCTTGACAACTTGAAAGCAATCAGGAAACTTCCAAGTACCAAACATTATGAGCACCGAGAAAGGCACTGTCCTGAAGAACCTCCTACCTGCCTTGTCCCTCTTCCAGAAGGATATAGACGCCCAATTACATGGCCCAAAAGCAGAGAGAAGATATGGTATTACAACGTTCCACACACTAAGCTTGCTGAATATAAGGGCCATCAAAATTGGGTGAAAGTTACAGGCGAGTACCTTACCTTTCCGGGTGGTGGAACCCAATTCAAGCATGGGGCACTTCATTATATTGACACTATACAACAGTCTGTACCTGATATAGCTTGGGGCAGACGCTCACGGGTGGTATTAGATGTTGGATGTGGTGTTGCCAGCTTTGGTGGCTTTCTCTTTGAGAGAGACGTACTTACAATGTCTTTGGCACCAAAAGATGAACATGAAGCTCAGGTACAATTTGCACTTGAGAGGGGAGTTCCTGCCATTTCTGCCGTGATGGGTACAGTGAGGCTTCCCTACCCTGGAAGAGTATTTGATATAGTCCATTGTGCACGATGTAGAGTTCCGTGGCATATAGAAGGTGGAAAACTTCTCTTGGAGCTGAATAGAGTATTGCGGCCTGGTGGTTTCTTTGTTTGGTCTGCTACTCCTATTTATCAAAATAAGACAGAAGATGTTGAAATATGGAAAGAAATGAAAAAGCTAATAAAAGCAATGTGCTGGGAAGTTGTGAACATTACCAGGGATAAACTTAATGGAGTTGGTATAGCAACATACAGAAAGCCAACTTCTAATGAATGTTACGAGCAACGATCTAATAACGAGCCACCTATGTGTCTAGATTCTGATGATCCAAATGCAGCATGGAACGTTCCATTGCAATCTTGCATGCACAAAGTGCCAGTGAGTTCATCAGAGCGTGGTTCACAGTGGCCAGCGCAATGGCCAGCAAGACTGACTAATGTACCTTACTGGTTGACAAGTTCTCAAGTTGGAGTTTATGGAAAGCCTGCTCCTGACGATTTTACTGCGGACTATGATCACTGGAAACGTGTTGTTTCCAAGTATGTAGATGGGATGGGAATTCAATGGTCAAATGTTCGAAATGTCATGGATATGAGATCAGTCTACGGAGGGTTTGCTGCAGCTATGAAAGATTTGAATATTTGGGTCATGAATGTAGTTTCAGTAGATGCTCCAGACACACTTCCTATTATATATGAACGCGGTCTTTTTGGCATGTATCATGATTGGTGTGAATCGTTTAGCACTTATCCTAGGTCCTACGATCTCCTCCATGCAGATCATCTGTTTTCAAGACTCAAGAAAAGGTGTAATTTTCAAGCTGTTGTGGCTGAGGTTGATCGGATTTTGAGGCCCGAAGGAATGCTTATTGTTCGAGACACTGCTGAGGTAATTAACGAGCTTGAGAGCATGGTGAAATCTATGAACTGGGAGGTTCGCATGACTTACACTAAAGAAAATGAGGGCTTTTTGGGTGCCCGGAAGTCCATGTGGCGGCCTACGGAGACTGTGACGCTCGAATATGCTGTTTGA 2508 0.4298 MAQARYTRIDNNKKSSSSFCSTVTIVVFVALCLVGVWMMTSSSVVPAQNADVTQDNKTDAAQDSTIDMKEAQSDTKEQVTDNNNSGNTPKFEDNQGDLPEDATKGDTNVTSENNSDVKENQEEKSEDKSEEKSSKESKTEDGDKKTEDKDSPTESTESNSQTTENKDSGETEKPGSGDSEKKSESDESDTKSESNENKQSDSDESANKSDSDGSEKKSDDSSETTDNKTEDKVQQSDKESDVSSNEKETDDSANKQTSTEVYASGAQSELLNENTTQNGSFSTQAAESKNEKESQASSKQSTVYNWKLCNSTAGPDYIPCLDNLKAIRKLPSTKHYEHRERHCPEEPPTCLVPLPEGYRRPITWPKSREKIWYYNVPHTKLAEYKGHQNWVKVTGEYLTFPGGGTQFKHGALHYIDTIQQSVPDIAWGRRSRVVLDVGCGVASFGGFLFERDVLTMSLAPKDEHEAQVQFALERGVPAISAVMGTVRLPYPGRVFDIVHCARCRVPWHIEGGKLLLELNRVLRPGGFFVWSATPIYQNKTEDVEIWKEMKKLIKAMCWEVVNITRDKLNGVGIATYRKPTSNECYEQRSNNEPPMCLDSDDPNAAWNVPLQSCMHKVPVSSSERGSQWPAQWPARLTNVPYWLTSSQVGVYGKPAPDDFTADYDHWKRVVSKYVDGMGIQWSNVRNVMDMRSVYGGFAAAMKDLNIWVMNVVSVDAPDTLPIIYERGLFGMYHDWCESFSTYPRSYDLLHADHLFSRLKKRCNFQAVVAEVDRILRPEGMLIVRDTAEVINELESMVKSMNWEVRMTYTKENEGFLGARKSMWRPTETVTLEYAV* 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3709 835 MobiDBLite consensus disorder prediction 116 154 - -
Amo13g3709 835 PANTHER PMT26-LIKE PROTEIN, PUTATIVE-RELATED 2 831 - -
Amo13g3709 835 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 2 831 IPR004159 GO:0008168
Amo13g3709 835 Coils Coil 118 138 - -
Amo13g3709 835 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 316 812 IPR004159 GO:0008168
Amo13g3709 835 MobiDBLite consensus disorder prediction 77 92 - -
Amo13g3709 835 MobiDBLite consensus disorder prediction 68 301 - -
Amo13g3709 835 CDD AdoMet_MTases 434 529 - -
Amo13g3709 835 MobiDBLite consensus disorder prediction 255 301 - -
Amo13g3709 835 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 664 816 IPR029063 -
Amo13g3709 835 MobiDBLite consensus disorder prediction 166 254 - -
Amo13g3709 835 Gene3D Vaccinia Virus protein VP39 406 571 IPR029063 -
Amo13g3709 835 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 339 582 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3709 Amo-Chr13 125404610 125410258 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3709 - - gmx:100790783 1240.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3709 13 125404610 125410258 Amo13g3709 13 125404610 125410258 ECH