Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3525 ATGTTCAGGCCTGCAAGATGGAGAACCGACAAGAACAAGGTCAAAGCTGTTTTCAAGCTCCAATTCCATGTGACTCAGATGCTGCAATCTGGAGTGGATGCATTGGTGCTCTCTATAGTCCCTGTAGACATTGGAAAAGCAACAGCAAGATTAGACAAAGCTTCCGTTAATGGTGGAATTTGTAGATGGGACAATCCTGTCTATGAAACTGTCAAGTTTGTTCAGGACTCCAAGACTGGAAAATTCACTGAGAGAATCTATTACTTTGTGCTCTCCACTGGGTTATCCAAAGCTAGCACCATTGGTGAAGTTTCTATAGACTTTGCAGATTATGCTGAGGCTACAAAGCCTTCCTCTGTCTCTCTTCCCTTCAAGAATTCTCGTTGTGATGCTGTTTTGCATGTATCAATTCAGAGACTACAAGAAAACAATGATAAAAGAGAGGAAGAAGAATGCGAAGATGGAAAAATAAAACATGATGCTAATAATAATAATAAGAGTTTGAGAACCTATTTAACCAATGGACATGCAGATGAAAGCACCAGAAGTGATACATCTGAAGACGTTTCTGCCAAATCAAACACCAGAGGAGCTGAATTGAGTGCTGATTGTAGGACTTCTAGTGGATCTGACTTAACATTGTCAAGTTCTGAGGGCAGCGGTGGGCTTGATACACCTCGAGAACACGGAGTAAGAAATGCTAGCATCCAACCCAACACAAATGGTTTTGTTTCTCCTCCAGGGCACCCTCAGGACCCTCAAAATCCTGCTGCAAATGCTACAGTGTATGATGTGCAACAGAGACCACAATGGGGCTGGTTAGCTGCTTCAGAACATGGTTTGAGTACAGACGATTCAACAAATGATTCTCAGGATGCCCTACCAAAGGAAGGGTCCCAACCAGCAGCTGATATGGAAATTGAAAGGCTCAAAGCTGAACTTACTGCCATTGCCAGGCAGAAGGATATGTCAGACTTGGAACTACAGACTCTCAAGAAACAAATCATAAAGGAAAGCAAAAGGGGACAGGACCTCTCAAAGGAAATCATGAGCTTGAAGGAGGAAAGAGATGCACTCAAAGCAGAATGTCAGAATCTCAAGTCTTTTCACAAAAGAATGGAAGAGGCTAAAGCAAGCACCAAGTCACTATTGGATACTGGAGACCTTCGCACTCTTGTTGAGGAAATTAGACAAGAACTGAGTTATGAGAAGGACCTTAATGCAAATCTTCGATTACAGTTAAACAAGACGCAAGAATCAAATGCTGAACTTGTTCTCGCTGTGCAGGACCTGGATGAAATGTTAGAGCAGAAAAATAAGGAAATATATAATCTTTCCAATAACCATGAACCGAATAAGAACTCTCATGCGATGGGGAGAAAAAGTTTAAAATATGAAACAGAAGATGATGAAGATCAGAAAGAATTGGAAGAGCTGGCTAGGGAGCACAGCGATGCCAAGGAGACTTACTTACTTGAGCAAAAAATTTTAGATCTGTATGGCGAAATAGAGTTGTATAAGAGAGACAAAGATGAGTTAGAGATGCAGATGGAGCAGCTTGCACTAGACTATGAGATATTGAAACAGGAAAACCATGACATAGCATACAAGCTGGAACAGAACCAACTGCAAGAACAGTTGAAAATACAATATGAATGCTCATCTCCTCCTCCTGCTATAGAGGGGATCGAAAGCCACACTGAGAGTCTGGAGAATCAATTCAAGAATCAGTCAGAAGAATTGTCAAATTCTATGGCTACTATCAAGGAACTTGAAGCCCAAGTCTGCAAGTTAGAGGCACAAGTCAGCAAGTTAGAGGAGGAAATGGAGAAACAGGCCCATGGGTTTGAATCTGATCTAGATGCTCTGATACGTGACAAAGCTGAGCAGGAGCAAAGAGCCATCCAAGCTGAGGAGGCTTTGCGTAAGAGCAGGAGCATAGAAAGCCATATCAAAAGTCTGGAAAGTCAACTTATGAAAGAGTCAGAAGAATTGTCAAATTCCCTGGCTACTATCAAGATACTTGAAGCCCAAATCAGCAGGTTAGAGGAGCAACTAGAGAAACAAGCTGATGAGTTTGAGGTTGATCTAGATGCTGTGACACGTGACAAAATCGAGCAGGAGCAAAGAGCCATCCAAGCTGAGGAAGCTTTGCAAAATGTCATGAGCACTGTCGAGAGTTTGGAAAATCAACTTGTGAAACAATCAGATGAATTGTCGAATTCTCAGGCTACTATCAAGGTACGTGAAGCCCAAATTAGCCGGTTAGAGGAGAAAATGGAGAAACAGGCCCGTGGGTTTGAAGCTGAGCTTGATACTGTGATGTGTAACAAAGTTGAGCAGGAGCAAAGAGCCATCAATGCTGAGGAAGCCTTGCAAGAGAGCAGGAGCACTGAACGTTGTATCGAGGTTCTGGAAAATCAACTTAAGAAACAATCAGAAGAATTGTCAGATTCTCTGGCTATTATCAAGGTACTCGAAACCCAAATCAGCAGGTTAGAGGAGGAAATGGAGAAACAAGCTCATGGATTTGAAACTGATCTAGATGCTGTGACACGTGACAAGATTGAGCAGGAGCAAAGAGCTATCCGAGCTGAGGAAATTTTGCGTAAGACAAGGCTTAGAAATGCTAATACTGCTGAGCGGCTTCAAGAAGAATTCAAAAGGCTCTCAGTGCAAATGGCCTCTACATTTGATGCAAATGAGAAGGCTACCATGAGAGCAATGAAAGAAGCTAGCGAACTTCGTGCCAGAAAAAGACTGGTGGAACAAATGCTGCATAAAGTCAAAGAAGAGCTTCACTCTGTCAAAGGTGATTATGAGGTAAAACTGATTGAGCTTTCCAATCAAATTGATGTCATGACAGTCAAAATACAACAGATGTCGTTGGAAATTGAGGAGAAGTCCAAGCAGCTTGAAAATCAGAAGAATCATGATGAACAAGTTAGTAGTGATTTCCCTGAGGAAATGCAGAATCTAAAAGCTGAGAATGAAAGGCTTAAAGCAGAGATTTCATGCTTCTCAGAGCACTTAGTACAACAAGAAACTTTGAGAACGGAACTGGAAGCTATGAAGAAATCAGTTGAAGAATCTGAGACTCTGTTGCAGAGAAAGACCGTGGAAAGAAATGAGCTGGTGATTACAATTGTTTTATTGAAGGAGGAGGCAGAACAGCTGCTTGATGAATTAAGTAAAATGAGGGATCTCAAAAATGAAAAAGAAACAGTGGGTAGTAGAGACTTGCAGTCAGAGTTAGAAGAACTTAGGGCTCAATATGATGCCTTGAAACGTTCTCTTTCTGAGGATGAGGCTGAGATAGAAAAATTAAGAAAAGAAATTTTCCAGCTAAAGGGTGAACTGAAGAAGAAGGATGATGCATTAGCCAACAATGAGAAGGATAGGAATGGACACACACAACTTTCTGATGGAGCTAAAACCAGTCCAAAGAACAAAAAATCTGCTCCAAATTCTCAAAATTCAAAAGAAATGGCAAGCCTCAGAGAGAAAGTAAAAATGCTCGAGGCCCTGATAAAGTCAAAGGAAACTGCATTGGAAACGTCAACTTCCTCTTTTCTGGAGAAGGAAAGGGAACTGCAGTCCAAAATTGAGGAACTGGAGGACAAGGTGGAGGAATTCAGTCAGAGCATTGCACTGCAAACGGTTGTCGAGGATAAGTGTGTTACAGTTGAGCCTCCTAATGATTCTGCATGTGTGTCTGGACAAAACGGTGCTGCTGCTGCGTTGTCATTATCCAAGAGCGATGCAAATTCCTCAGAGAAAGAAGCAGATATGTCCAGAGTGGATAATGGGGATGGCAACCTTTGCAGCGACATGTTAACCGAATTGTTGTTGTTGAAGGAAAGAAACAAATCGATGGAAAATGAGCTGAAAGAGATTCAAGAAAGATACTCCGAAATGAGTCTAAAGTTTGCAGAGGTAGAAGGTGAAAGACAGAAGCTTGTTATGACTGTACGGTATCTCAAGAATTCACGCAAGGGTGGTCAGTGA 4008 0.4182 MFRPARWRTDKNKVKAVFKLQFHVTQMLQSGVDALVLSIVPVDIGKATARLDKASVNGGICRWDNPVYETVKFVQDSKTGKFTERIYYFVLSTGLSKASTIGEVSIDFADYAEATKPSSVSLPFKNSRCDAVLHVSIQRLQENNDKREEEECEDGKIKHDANNNNKSLRTYLTNGHADESTRSDTSEDVSAKSNTRGAELSADCRTSSGSDLTLSSSEGSGGLDTPREHGVRNASIQPNTNGFVSPPGHPQDPQNPAANATVYDVQQRPQWGWLAASEHGLSTDDSTNDSQDALPKEGSQPAADMEIERLKAELTAIARQKDMSDLELQTLKKQIIKESKRGQDLSKEIMSLKEERDALKAECQNLKSFHKRMEEAKASTKSLLDTGDLRTLVEEIRQELSYEKDLNANLRLQLNKTQESNAELVLAVQDLDEMLEQKNKEIYNLSNNHEPNKNSHAMGRKSLKYETEDDEDQKELEELAREHSDAKETYLLEQKILDLYGEIELYKRDKDELEMQMEQLALDYEILKQENHDIAYKLEQNQLQEQLKIQYECSSPPPAIEGIESHTESLENQFKNQSEELSNSMATIKELEAQVCKLEAQVSKLEEEMEKQAHGFESDLDALIRDKAEQEQRAIQAEEALRKSRSIESHIKSLESQLMKESEELSNSLATIKILEAQISRLEEQLEKQADEFEVDLDAVTRDKIEQEQRAIQAEEALQNVMSTVESLENQLVKQSDELSNSQATIKVREAQISRLEEKMEKQARGFEAELDTVMCNKVEQEQRAINAEEALQESRSTERCIEVLENQLKKQSEELSDSLAIIKVLETQISRLEEEMEKQAHGFETDLDAVTRDKIEQEQRAIRAEEILRKTRLRNANTAERLQEEFKRLSVQMASTFDANEKATMRAMKEASELRARKRLVEQMLHKVKEELHSVKGDYEVKLIELSNQIDVMTVKIQQMSLEIEEKSKQLENQKNHDEQVSSDFPEEMQNLKAENERLKAEISCFSEHLVQQETLRTELEAMKKSVEESETLLQRKTVERNELVITIVLLKEEAEQLLDELSKMRDLKNEKETVGSRDLQSELEELRAQYDALKRSLSEDEAEIEKLRKEIFQLKGELKKKDDALANNEKDRNGHTQLSDGAKTSPKNKKSAPNSQNSKEMASLREKVKMLEALIKSKETALETSTSSFLEKERELQSKIEELEDKVEEFSQSIALQTVVEDKCVTVEPPNDSACVSGQNGAAAALSLSKSDANSSEKEADMSRVDNGDGNLCSDMLTELLLLKERNKSMENELKEIQERYSEMSLKFAEVEGERQKLVMTVRYLKNSRKGGQ* 1336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3525 1335 Coils Coil 958 978 - -
Amo13g3525 1335 MobiDBLite consensus disorder prediction 1250 1271 - -
Amo13g3525 1335 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 6 645 - -
Amo13g3525 1335 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 799 1333 - -
Amo13g3525 1335 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 647 721 - -
Amo13g3525 1335 MobiDBLite consensus disorder prediction 1140 1163 - -
Amo13g3525 1335 MobiDBLite consensus disorder prediction 144 163 - -
Amo13g3525 1335 Coils Coil 560 759 - -
Amo13g3525 1335 Coils Coil 496 530 - -
Amo13g3525 1335 Coils Coil 1014 1126 - -
Amo13g3525 1335 Coils Coil 1188 1215 - -
Amo13g3525 1335 Coils Coil 983 1010 - -
Amo13g3525 1335 Coils Coil 1156 1183 - -
Amo13g3525 1335 Coils Coil 912 932 - -
Amo13g3525 1335 MobiDBLite consensus disorder prediction 280 304 - -
Amo13g3525 1335 MobiDBLite consensus disorder prediction 164 179 - -
Amo13g3525 1335 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 11 146 IPR019448 -
Amo13g3525 1335 Coils Coil 778 843 - -
Amo13g3525 1335 MobiDBLite consensus disorder prediction 232 257 - -
Amo13g3525 1335 MobiDBLite consensus disorder prediction 280 295 - -
Amo13g3525 1335 Coils Coil 421 448 - -
Amo13g3525 1335 Coils Coil 469 489 - -
Amo13g3525 1335 Coils Coil 1275 1316 - -
Amo13g3525 1335 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 721 797 - -
Amo13g3525 1335 MobiDBLite consensus disorder prediction 144 257 - -
Amo13g3525 1335 MobiDBLite consensus disorder prediction 1125 1164 - -
Amo13g3525 1335 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 721 797 - -
Amo13g3525 1335 MobiDBLite consensus disorder prediction 1125 1139 - -
Amo13g3525 1335 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 6 645 - -
Amo13g3525 1335 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 799 1333 - -
Amo13g3525 1335 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 647 721 - -
Amo13g3525 1335 Coils Coil 342 376 - -
Amo13g3525 1335 MobiDBLite consensus disorder prediction 187 222 - -
Amo13g3525 1335 ProSiteProfiles C2 NT-type domain profile. 6 141 IPR019448 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3525 Amo-Chr13 119541074 119548782 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3525 - - adu:107479983 2447.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3525 13 119541074 119548782 Amo13g3525 13 119541074 119548782 ECH
Amo05g2464 05 52213661 52217635 Amo13g3525 13 119541074 119548782 PCT