Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3502 ATGGTTGAATCAATTGCTACCACTTCACTCCTTGGCCACCTTCCTGTCTGTGGAGGAAATTTGATAAGAGATGTTTCTGGTAAACGCAAATCTTTGAGTACTTGTAGGTTCCCAACTACTGAATTTCTTGGTGGAAGGATTGCTGTTTCTCTGCCTGTGCCAAAATCCAAGGGACATGGATTCTGGTCATCATCAATTAGGGCGCTTGCTGTGGAGCTCACAAGAGAAGCATATTCATATAGGGAAGACAAATTACCCAAGAAGGATAATTATAAGTTTGATAGTGGATTTGATCCAAGGCCTGGTTTGTGGCCTCCTGCAAATAGAGCGGATAACCCTTCGCTTCGGAATCCGTTGCTTCGACAAGAGAGGATGGGGTGTGGCTGGTTGGGTGTCATATTTGAGTGGGAGGGGGTTCTCATTGAAGACAACCCTGATCTTGAGAAGCAAGCTTGGCTGGTCCTCTCTCAAGAAGAAGGCAAATCCCCGCCTCCTGCATTCATCCTAAAGAGAATTGAAGGCATGAAGAATGAACAGGCGATTTCCGAGGTTCTTTGCTGGTCTAGGGACCCTGCGCAGATGAGAAGAATGGCTAACAGAAAGGAAGAAATCTACCAAGCCTTGCAAGGAGGGATATATAGTCTAATGCCTGAGTCCAAGGAGTTTGTGAGCGTTCTGATGCATCATAAGATACCAATGGCATTGGTTTCAACGCGTCCTAGAAAAACTCTTGAGTCTGCTGTGGGGCAAATTGGTATTGAAGACAATTTCAGTGTGATTGTAGCCTCAGAGGATGTTCACAGGGGGAAGCCTGATCCAGAGATGTTTGTTTACGCAGCTCAGCTCCTAAATTTCATACCTGAGAGGTGCATTGTGTTTGGAAACTCAAATCAAACAGTGGAGGCAGCACATGATGCTCGGATGAAGTGTGTTGCAGTGGCTAGCAAGCATCCTGTCTATGAATTGGGGGCTGCAGACTTGGTTGTCAAGCGCCTAAACGAGCTTTCAATTGTTGATCTGAAGAATCTTGCTGACATTGAATCACCTGAATTCGAACCTATGATGGAGATGGAGCTGGAAGAAGATTCAGACATATCATCGGTTGATGAAAATTTCTGGTAA 1122 0.4528 MVESIATTSLLGHLPVCGGNLIRDVSGKRKSLSTCRFPTTEFLGGRIAVSLPVPKSKGHGFWSSSIRALAVELTREAYSYREDKLPKKDNYKFDSGFDPRPGLWPPANRADNPSLRNPLLRQERMGCGWLGVIFEWEGVLIEDNPDLEKQAWLVLSQEEGKSPPPAFILKRIEGMKNEQAISEVLCWSRDPAQMRRMANRKEEIYQALQGGIYSLMPESKEFVSVLMHHKIPMALVSTRPRKTLESAVGQIGIEDNFSVIVASEDVHRGKPDPEMFVYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVKRLNELSIVDLKNLADIESPEFEPMMEMELEEDSDISSVDENFW* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3502 373 Pfam Haloacid dehalogenase-like hydrolase 133 313 IPR041492 -
Amo13g3502 373 Gene3D Putative phosphatase; domain 2 142 215 IPR023198 -
Amo13g3502 373 CDD HAD_BPGM-like 131 315 - -
Amo13g3502 373 Gene3D - 132 330 IPR023214 -
Amo13g3502 373 SUPERFAMILY HAD-like 132 335 IPR036412 -
Amo13g3502 373 PANTHER BETA-PHOSPHOGLUCOMUTASE-LIKE ISOFORM X1 2 367 - -
Amo13g3502 373 PANTHER 5-AMINO-6-(5-PHOSPHO-D-RIBITYLAMINO)URACIL PHOSPHATASE, CHLOROPLASTIC 2 367 - -
Amo13g3502 373 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 199 313 IPR006439 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3502 Amo-Chr13 119099917 119102834 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3502 K22912 - gmx:100798181 593.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3502 13 119099917 119102834 Amo13g3502 13 119099917 119102834 ECH