Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3460 ATGAGAAGAGGTGCAAATAATAATGGTAGAGCAGTCAACAACACTATGGATACTATAAACGCTGCTGCCTCTGCCATCGCAGCTTCTGCCCAAAATCGCGCTTCTCAACCAACTCAACAGAAGAAAAAATGGGGAAGCTTGTTGAACATAGCTGGGTGCTTTGGATATCAGAGGAATCGAAAGCGTATCGGGCACGCAGTCCTTGCTCCAGAAACAGCACCTTCTCGTGCAGATCCTACTGCACCTGCTGCCGTTATCTCAACACAAGTTCCTACCATAACACTTCCCTTTGTGGCACCTCCCTCTTCACCTGCCTCTTTCTTTCAATCAGAACCGCCTTCAACCGCGCAATCTCCGGTTGGTATTGTATCCCTCAKGTCTGTGTCTGCCAGTATGTACTCTCCTGGTGGCCCTGCTTCAATCTTTGCAATCGGCCCTTACGCGCACGAAACYCAATTGGTTTCGCCGCCTGTTTTCTCGGCATCATCCACTGCTCCTTTCACTCCACCTCCTGAGTCTGTCCACTTGACRACGCCGTCTTCGCCTGAGGTGCCCTTTGCTCAGCTACTTGACCCACAATATAGGAATGGAGAGACCTATCAAAGGATCCAAATATCTCACTATGATTTCCAATCCTATCAGTTTCAACCAGGTAGCCCGGTTGGTCAACTCATATCACCTAGGTCCGCCATCTCAGCTTCTGGAACCTCGTCGCCGTTTCCAGACACCGAGTTTCCTGCTGGTGGCTCCCATATACTTGACTTGCAAGCAGCAGACCCTTCCAAGCTTCTTAACTTGGAGAAATTTTCCGCTCATGAGAACCGCAAGTCAAAAGAAAGTTCTGGGTCTATAACACCTGATGCTGCAAGGTCCACAACTCAAGGAAATTTTCTTCCAAATCATTGGGTTTCTGAGATCAAAATGTCTCCACATCCGAGCAATAATGGCTTGAGTGAGATCAGTTTAAGCCATAGGGTATCATTTGAATTATCTGCCCAAAAAGGAATGAGATGTGTGGAAAACAAACTGCCATCACCATCATCATCAGCATGGACTAAGGTACTGTCAAAATTGAAATATGAAGCAGCAGCAACGGTAGACAAAGAAGAAAGTTGTAGAGAAACTAGGCATGTTGATGACCAAAAGGTAGCAGCAGCTGAAACTCCAAATGATGCAGCCAAACAAACCAATTTGGGTGCAGAGGATGCAYTAGTTGATGAGAAGGATGAGTCCTTAACCCTTTCTTCTGGCAAGGAATTCAAATTCACCAATGCAGATGGTGCAGATTCTCATGGCCCCAATATAGTTGCTGATTGGTGGGCTAATGAGAAAGTTGCAGGCAAGGAAGGAGGGGCCTCCAAGGACTGGTCTTTTTTCCCAATGATTCAACACAGTGTGAGCTAA 1404 0.4665 MRRGANNNGRAVNNTMDTINAAASAIAASAQNRASQPTQQKKKWGSLLNIAGCFGYQRNRKRIGHAVLAPETAPSRADPTAPAAVISTQVPTITLPFVAPPSSPASFFQSEPPSTAQSPVGIVSLXSVSASMYSPGGPASIFAIGPYAHETQLVSPPVFSASSTAPFTPPPESVHLTTPSSPEVPFAQLLDPQYRNGETYQRIQISHYDFQSYQFQPGSPVGQLISPRSAISASGTSSPFPDTEFPAGGSHILDLQAADPSKLLNLEKFSAHENRKSKESSGSITPDAARSTTQGNFLPNHWVSEIKMSPHPSNNGLSEISLSHRVSFELSAQKGMRCVENKLPSPSSSAWTKVLSKLKYEAAATVDKEESCRETRHVDDQKVAAAETPNDAAKQTNLGAEDALVDEKDESLTLSSGKEFKFTNADGADSHGPNIVADWWANEKVAGKEGGASKDWSFFPMIQHSVS* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3460 467 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 3 467 IPR040420 -
Amo13g3460 467 MobiDBLite consensus disorder prediction 267 296 - -
Amo13g3460 467 MobiDBLite consensus disorder prediction 219 251 - -
Amo13g3460 467 MobiDBLite consensus disorder prediction 219 243 - -
Amo13g3460 467 MobiDBLite consensus disorder prediction 281 296 - -
Amo13g3460 467 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 3 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3460 Amo-Chr13 116273594 116276354 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3460 - - adu:107479926 901.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3460 13 116273594 116276354 Amo13g3460 13 116273594 116276354 ECH