Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3414 ATGAAAGATCCGGAGAAGATAATTTGGGAACACGCTAGGAGCCCCAAATCCGGCACCCCTCTAGGTGGCGCCGCCGCCTCACAGCACAGAACATTGCCCAAGCTTCTGGTTCTGCTTATCCTCTTCGTTTCAGTCACCTACGTCGTCTACACACTCAAGCTCCTCACCACCTCACGTGACTGTCACGAGCCCCCATTCTCCACCCACACCCACATCCTCTCAGGAATAGGACTAACCGCAATCCCCACCATCAATGCCACCGCCTCCACCCTCAGGCTCTTGAACCGCACCTCCGCCGTCACTCGCCGCGAATCTCGGGAAACCGCCACCGACCAGACACAGCTCCGCCACGTTGTCTTCGGGATCGCGGCCTCGTCGAAGCTCTGGGAGAAGAGGAAGAACTACATCAAGCTATGGTACAAGGCGAGCGAGATGCGCGGCGTGGTGTGGCTGGACAACAAGGTTAGCTCCGGCGGGATGGGAGAGGGGCTGCCGCCGGTGAGAATCTCGGGCGACACTTCGAAGTTCTCGTACACGAACAAGCAGGGACACCGTTCGGCGATCAGGATCTCGCGGATCGTGTCGGAGACGCTGGCGATGGGAATGGAGAACGTGCGGTGGTTCGTGATGGGGGACGACGACACCGTTTTCGTGACGGAGAATCTAATTAGGGTTCTGAGGAAGTACGATCACAACCAGTTCTACTACATTGGGAGCTTATCGGAGAGCCACCTTCAGAACATATACTTCTCTTACGGCATGGCCTACGGCGGCGGAGGGTTCGCCATCAGCTACCCTCTGGCGAAGGCCCTCCAGACAATGCAAGACCGCTGCATTCAGAGGTACCCTGGCTTGTACGGCTCCGATGACCGGATGCAGGCTTGCATGGCTGAACTCGGTGTTCCACTCACCAAGGAGGCCGGGTTTCACCAGTATGATGTGTATGGAAACTTGTTCGGGCTCCTTGCAGCTCATCCCGTGACTCCATTGGTGTCCCTGCACCACCTTGATGTGGTTGAGCCCATCTTCCCCAATGTGAGTCGCGTAGAAGCCCTTCAACGGCTTACGGTACCAATGAAGCTTGACTCAGCAGGCCTCATGCAGCAATCCATCTGCTACGACAAATCAAAGAGCTGGACCATTTCCGTTTCATGGGGTTTCGCGGTTCAGATATTCCGCGGCGTGTTTTCGCCCCGCGAGATGGAAATGCCTTCAAGAACATTCTTGAATTGGTATAGAAGAGCAGATTACACGGCATATGCATTTAACACGCGTCCAGTTAGCAGACACCCATGCCAGAAGCCTTTTGTGTTTTACCTGTCAAAGGCAAGATTGAATTCCACAACACAACAGACACTGACTGAATATGAGAGGCATCGCATTCCTCATCCTGAATGCCGCTGGAAGATGGCTAATCCCGCTTTTCTCGACAGAGTGGAGGTATATAAGAAGCCAGATCCACATCTATGGGATAGAGCTCCAAGGAGGAACTGTTGCAGAGTTGTCAAGTCTTCTAAGAAGAAGAAAGGGACAATGGTGATACATGTGGGTGTGTGTGGGGAAGGTGAGGTAAGCGAAGCATAG 1584 0.5417 MKDPEKIIWEHARSPKSGTPLGGAAASQHRTLPKLLVLLILFVSVTYVVYTLKLLTTSRDCHEPPFSTHTHILSGIGLTAIPTINATASTLRLLNRTSAVTRRESRETATDQTQLRHVVFGIAASSKLWEKRKNYIKLWYKASEMRGVVWLDNKVSSGGMGEGLPPVRISGDTSKFSYTNKQGHRSAIRISRIVSETLAMGMENVRWFVMGDDDTVFVTENLIRVLRKYDHNQFYYIGSLSESHLQNIYFSYGMAYGGGGFAISYPLAKALQTMQDRCIQRYPGLYGSDDRMQACMAELGVPLTKEAGFHQYDVYGNLFGLLAAHPVTPLVSLHHLDVVEPIFPNVSRVEALQRLTVPMKLDSAGLMQQSICYDKSKSWTISVSWGFAVQIFRGVFSPREMEMPSRTFLNWYRRADYTAYAFNTRPVSRHPCQKPFVFYLSKARLNSTTQQTLTEYERHRIPHPECRWKMANPAFLDRVEVYKKPDPHLWDRAPRRNCCRVVKSSKKKKGTMVIHVGVCGEGEVSEA* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3414 527 PANTHER FRINGE-RELATED 26 526 - -
Amo13g3414 527 Pfam Protein of unknown function, DUF604 246 499 IPR006740 -
Amo13g3414 527 Gene3D - 105 361 - -
Amo13g3414 527 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 26 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3414 Amo-Chr13 114605127 114611349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3414 2 522 Glycosyltransferase AT5G41460 67.939 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3414 - - gmx:100818244 812.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3414 13 114605127 114611349 Amo13g3414 13 114605127 114611349 ECH
Amo13g3414 13 114605127 114611349 Amo03g2426 03 104248326 104254146 hybridization