Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3397 ATGGCGGCACCTGAATCCCCTGTCTGCTATGTCGGTGTCGCCAGGCAATCCGCTGCTTTTCGCCTCATGAAGCAAATGGGATGGGAAGAAGGTGAAGGCCTTGGCAAAGAGAAGCAGGGAATCAAAGGCTATGTCCGTGTTCAAAACAAGCAAGACACTATTGGAATTGGCTTAGAGAAGCCAAACAATTGGGCTTTTGACACTACTCAGTTTGATAATATCCTCAAAAGGTTGAAAGTGCAAGCTCCACAAGTTGAAGACTCAGGAATAGAGGAAAGAAAACCTAATGTGCGAACCAAGACTAGTGTACCTTTTGATGATGAGGACTCTGTCTCCAAAGCTACCAGACCACAAGGAAGATACAAGAGAAGAGAGAGGGGGAAGCTCGTCTCTGAATATTCCTTAAAGGATCTTGAAGGAATTCTTGTTAAAAAGGGTGAAGTATCTGACGTTGATGATGAACTGGACTTGTTAAAGGCATCTGAAATTCAAAATGTTAAAGAACCTGCTTATCCAAGCATTCCTCCAGAGTGGTGGGGCTATAAGTATGGGTTTGTTTCTGGTGGATTTCTTGGGGCAGAATTAAAGAAGAGAAAATTCCTTACATCTGAAGGTGCTAAAAACAGGATGGAGAGAACTGCATTTCATGAAGAAGATCAAGAAAATCTCTACAACCTAGTCCAAGACAAATCCACCACCGGAAAGCAAGGACTAGGCATAAAGGACAGGCCCAAAAAAGTAGCTGGCTGCTATTATCAGGGTAAAAAGACATCATTTGATAATAGTGATGATGAAGGATCTAATGATACTGATTCTTTGGAAAAACAAACACACAACAATTTAGTCAAAGTAGAAAAGGTTGTTGAATCCAAAGTGAAGCTGAAGAAGTTGTGTAAACAACTTTTACGAACGGTGCCTGGAGAATCATTGAAACTGAAACAGCTCAAAGCCCTTATTGATGAGCATTCATCTTCGGTTTTGTCCAACTTTTCATCGAAAAAAGAGGCTATTGCTTACCTGAAACAAAAGCTTACAGGGAGTCGGAAGTTTTGTATTGAAGGGAAAAGAGTTCGATTGGCATCTTAA 1086 0.4116 MAAPESPVCYVGVARQSAAFRLMKQMGWEEGEGLGKEKQGIKGYVRVQNKQDTIGIGLEKPNNWAFDTTQFDNILKRLKVQAPQVEDSGIEERKPNVRTKTSVPFDDEDSVSKATRPQGRYKRRERGKLVSEYSLKDLEGILVKKGEVSDVDDELDLLKASEIQNVKEPAYPSIPPEWWGYKYGFVSGGFLGAELKKRKFLTSEGAKNRMERTAFHEEDQENLYNLVQDKSTTGKQGLGIKDRPKKVAGCYYQGKKTSFDNSDDEGSNDTDSLEKQTHNNLVKVEKVVESKVKLKKLCKQLLRTVPGESLKLKQLKALIDEHSSSVLSNFSSKKEAIAYLKQKLTGSRKFCIEGKRVRLAS* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3397 361 PANTHER G PATCH DOMAIN CONTAINING PROTEIN 283 361 - -
Amo13g3397 361 PANTHER G PATCH DOMAIN CONTAINING PROTEIN 1 276 - -
Amo13g3397 361 MobiDBLite consensus disorder prediction 86 123 - -
Amo13g3397 361 ProSiteProfiles G-patch domain profile. 15 61 IPR000467 GO:0003676
Amo13g3397 361 PANTHER BNAA09G11800D PROTEIN 283 361 - -
Amo13g3397 361 PANTHER BNAA09G11800D PROTEIN 1 276 - -
Amo13g3397 361 MobiDBLite consensus disorder prediction 85 123 - -
Amo13g3397 361 Pfam G-patch domain 17 58 IPR000467 GO:0003676
Amo13g3397 361 SMART G-patch_5 13 59 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3397 Amo-Chr13 113001254 113005549 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3397 K11135 - gmx:100783709 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3397 13 113001254 113005549 Amo13g3397 13 113001254 113005549 ECH
Amo13g3397 13 113001254 113005549 Amo03g2402 03 102622918 102627391 hybridization