Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3379 ATGAGGGTGTTGTCATCAAGGTTCAAGTTTGTGTCAAGAGCAGTGGCGCACGAGGATCATGATCATAGTGAGGTGCAAAGAATAACGTACCCTACTACAGAAGGAACAAGGTTGGGGACTTGTCTAACAGTTTGGAAAAAATCCCTTGTCATTAATTGCAAAGGATTCACAGTCATCGATTCATGTGGAAATCTGGCGTACCGAGTTGACAATTACAGCGTCCACCCTCACCAACTCACTCTCATGGATGCTTCTGGAAACTCTCTCCTCACCATGCACCGCCGCCGCACGAAGCTTGGACTTGTATATAGCTGGTATGTGTACGAAGGGGAGAATGAGGGAAGAGAGAAAGAGAGTGCAGTGTGTTGTGTGAGGAAGCGTGTGAATATCTTAAAGGGCAATGGCAATCCCAGGGTTGAGGCATGCGTGTATGGTTTATTAGGTCCAGAGTCAGATAAAAAACGACATGGACATGCCGCGTTTACAGTCGAAGGTTCCTATGCAGATAGAACATGTAAGGTGTTGGATAAGTCCAAGAGTGTGGTGGCTGAAATCAAGAGAAAAGAAGCCAATTCCGAACACGTTTCTTTTGGGATAGACATTTTTCACTTAATTGTTCACCCTGGCTTTGATCCTACATTTGCCATGGCACTCCTTTTACTACTCGACCAAATGTTTTCATAA 684 0.4488 MRVLSSRFKFVSRAVAHEDHDHSEVQRITYPTTEGTRLGTCLTVWKKSLVINCKGFTVIDSCGNLAYRVDNYSVHPHQLTLMDASGNSLLTMHRRRTKLGLVYSWYVYEGENEGREKESAVCCVRKRVNILKGNGNPRVEACVYGLLGPESDKKRHGHAAFTVEGSYADRTCKVLDKSKSVVAEIKRKEANSEHVSFGIDIFHLIVHPGFDPTFAMALLLLLDQMFS* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3379 227 PANTHER PROTEIN LURP-ONE-RELATED 17 16 226 - -
Amo13g3379 227 PANTHER - 16 226 IPR007612 -
Amo13g3379 227 Pfam LURP-one-related 41 220 IPR007612 -
Amo13g3379 227 Gene3D - 37 227 IPR038595 -
Amo13g3379 227 SUPERFAMILY Tubby C-terminal domain-like 40 226 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3379 Amo-Chr13 112267537 112268458 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3379 - - lja:Lj0g3v0155199.1 285.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3379 13 112267537 112268458 Amo13g3379 13 112267537 112268458 ECH
Amo05g2413 05 51625898 51627699 Amo13g3379 13 112267537 112268458 PCT