Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3286 ATGGAAGGCATGAGATATGTCGTGGAGGTTGAGAAAGCGAGGGAAGCAACACAAGGTAAACCATCAATGGGTCCCGTTTACCGGGGCAAGTATCCGAATGATTCCACTACTCCTCCCATCGACGTTCTCAATAGCTGTTGGGACATTTTCCGATCGGCTTATGAGAAGTATCCAACAAATACAATGCTTGGTACCCGGGAAATTGAGAATGCAAAAGCTGGCAGGTACAAGTGGCAAACTTACAAAGAAGTGTATGAAGTGATACAGAAAGTTGGAAGCTCTATCCGCAGTTGTGGTTATGGGCAAGGAGTGAAATGCGGTATCTATGGTGCCAATTGCCCTGGGTGGATAATAAGCATGGAGGCCTGTAATGCTCATGGACTTTATTGTGTTCCTTTGTATGATACATTAGGTGCTGGAGCAGTGGAGTTTATTATATGCCATGCAGAAATCTCAATTGCTTTTGTAGAAGAAAAGAAGATATCTGAGCTATTGAAGACATTTCCAAATGCATCAAAGTTTCTCAAGACACTTGTGAGCTTTGGAAAGTTTACTCCAGTACAAAAGCAACAAGTTGAAAATTTGGGGGTGAAAAGCTATTCATGGGATGAATTTTTACAAGTGGGTGAAAATCAGAATTTTGATCTTCCTGTGATAAAAAAGAGTGACATCTGTACAATAATGTATACAAGTGGAACAACTGGTGACCCTAAGGGAGTCCTGTTATCCAATGAGTCCGTACTTACTGCGGTATCTGCGATACTGCAATTTCTAAGTAGTTGCAAACACTCTTTGCGGAACAAAGAAGTGTATATATCATATCTTCCCCTTGCTCATATCTTTGATAGGGTCATTGAGGAGGCAATGATATATGTTGGTGCCTCAATAGGATTCTGGCGTGGGGATGCCAGATTGTTACTTGAAGACGTTGCGGAGCTAAGACCAACTATTTTCTGTGCTGTTCCACGTGTGCTTGAAAGAGTGTACTCAGGCTTGCAAAATAAGATTTCTGCCGGGGGGTTTGTGAAGCAGACAATGTTCAATTTTGCTTACTCATACAAGTTGAATAATCTAATGAACGGAGTAGGCATTGAGGACGCAGCTCCATTGTTTGACAGCCTTGTATTTAGCAAGATAAAACAAAGCTTAGGGGGTAGAGTACGAATTCTTTTGTCTGGAGGAGCACCACTAGCTAAACATGTGGAACTTTTTTTGCGGGTTGTGACTTGTTCTCTTGTCATACAAGGATATGGATTGACTGAAACGGGTGCGGCATCATTTGCCCAGCTATTAAACAACTTCGACATGCTTGGTACAGTGGGGGTTCCATTACCATATGTGGATGCATGCTTGGAATCTGTTCCTGACATGGGATATGATGCCCTTGCAAGCACACCAAGGGGAGAGGTATGTATAAGGGGTGGTACTTTGTGTTCAGGGTATCACAAAAGGGAAGATCTCACCAACGAGGCTATAATAGATGGATGGTTCCATACAGGGGATATTGGAGAGTGGCAACCAAATGGAAACTTGAAAATTATTGATCGGAAGAAGAATATATTTAAGCTTTCACAAGGAGAATATGTTGCTGTTGAACACCTGGAGAATGTTTATGGTCAAAGCTCTGTTCTTGAATCAATATGGGTCTATGGAAGCAGTTTCGAGGCCTACCTTGTTGCCGTGATTAACCCCAAGAAAGATGCACTTGAAAGGTGGGCGGAAGAAAATAATATAACCAAGGACTACAATTCTCTATGTGAAGATCCAAAGGCAAAAGCCTACGTGCTTGCAGAACTCGTAAATACTGCCAAGGCAAAAAAGTTGAAAGGTTTTGAGTTCATAAAAGCGATTCATCTTGACCCGGTTCCTTTTGACCAAGACCGTGACCTTATCACGCCAACATTTAAGAAGAAGAGACCTCAGATGCATAAATACTACAAGGTACACCAATATTTTGTTGATGAATGA 1968 0.4187 MEGMRYVVEVEKAREATQGKPSMGPVYRGKYPNDSTTPPIDVLNSCWDIFRSAYEKYPTNTMLGTREIENAKAGRYKWQTYKEVYEVIQKVGSSIRSCGYGQGVKCGIYGANCPGWIISMEACNAHGLYCVPLYDTLGAGAVEFIICHAEISIAFVEEKKISELLKTFPNASKFLKTLVSFGKFTPVQKQQVENLGVKSYSWDEFLQVGENQNFDLPVIKKSDICTIMYTSGTTGDPKGVLLSNESVLTAVSAILQFLSSCKHSLRNKEVYISYLPLAHIFDRVIEEAMIYVGASIGFWRGDARLLLEDVAELRPTIFCAVPRVLERVYSGLQNKISAGGFVKQTMFNFAYSYKLNNLMNGVGIEDAAPLFDSLVFSKIKQSLGGRVRILLSGGAPLAKHVELFLRVVTCSLVIQGYGLTETGAASFAQLLNNFDMLGTVGVPLPYVDACLESVPDMGYDALASTPRGEVCIRGGTLCSGYHKREDLTNEAIIDGWFHTGDIGEWQPNGNLKIIDRKKNIFKLSQGEYVAVEHLENVYGQSSVLESIWVYGSSFEAYLVAVINPKKDALERWAEENNITKDYNSLCEDPKAKAYVLAELVNTAKAKKLKGFEFIKAIHLDPVPFDQDRDLITPTFKKKRPQMHKYYKVHQYFVDE* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3286 655 Gene3D - 42 516 IPR042099 -
Amo13g3286 655 SUPERFAMILY Acetyl-CoA synthetase-like 39 647 - -
Amo13g3286 655 Pfam AMP-binding enzyme 69 524 IPR000873 -
Amo13g3286 655 CDD LC-FACS_euk 74 647 IPR045311 GO:0004467|GO:0006631
Amo13g3286 655 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 5 647 - -
Amo13g3286 655 PANTHER LONG CHAIN ACYL-COA SYNTHETASE 4-LIKE 5 647 - -
Amo13g3286 655 ProSitePatterns Putative AMP-binding domain signature. 227 238 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3286 Amo-Chr13 104981109 104986173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3286 5 652 Acyl Lipid Metabolism Gene Families AT4G11030 65.231 0.0 920
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3286 K01897 - gmx:100811306 999.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3286 13 104981109 104986173 Amo13g3286 13 104981109 104986173 ECH