Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3072 ATGGAAGGAGGAGTGCCAGAAGCCGATGTCTTTGCTTTCAGAGAGTGTTTGGCACTTTCATGGAAGAATCCTTATGTTCTTCGTCTTGCTTTCTCTGCTGGAATTGGTGGCCTTCTCTTTGGCTACGACACAGGAGTAATATCCGGGGCTCTTTTATATATTAGGGATGATTTCAAAGCTGTGGATAGAGAGACATGGCTCCAGGAAGCCATAGTGAGCATGGCACTAGCCGGAGCAATAATAGGAGCCTCTGTTGGAGGATGGATCAACGATCGATTTGGAAGAAGAAAAGCAATAATTCTTGCCGATACACTCTTCTTCATTGGATCAGTTATCATGGCTGCTGCAACAAATCCTGCAATTCTCATCGTGGGTCGAGTTTTCGTTGGACTCGGCGTTGGAATGGCGTCGATGGCGTCCCCATTGTACATCTCGGAAGCTTCTCCGACCAGAGTTCGCGGTGCTCTGGTTAGTCTCAATGGATTCCTCATCACTGGTGGACAGTTTCTGTCCTATCTCATCAACTTGGCTTTCACAAATGCACCAGGAACATGGAGGTGGATGTTAGGAGTGGCTGCACTGCCGGCATTAATACAAATAGTTTTGATGACTATGCTCCCAGAATCACCTCGTTGGTTATTCAGAAAGGAAAGAGAAGAAGAAGCGAAAACAATTTTAAGAAGAATTTACCCTCCAGAGGATGTTGAAAATGAAATCAACACACTTAAGGAGTCAGTGGAGATGGAAATCAAGGAAGCTTCAAACTCAGATAAGGTGAGCATAACAAAAATGCTGAAAACAAAAACAGTTAGAAGAGGCTTATATGCAGGAATGGGCCTCCAAATCTTCCAACAATTCGTTGGCATCAACACAGTTATGTACTACTGCCCCACAATCGTGCAACTAGCTGGATTTGCATCAAACAGAGTAGCACTCCTTCTTTCTCTTGTAACTGCTGGTCTCAATGCAATTGGTTCAATTATGAGCATTTACTTCATTGACAAGACTGGCAGGAGGAAGCTTCTTTTGTTCAGCTTGTCCGGCGTTGTGGTGTCCCTTGTTGTCTTGACTGTTGTGTTCCATGAGACCACCACTCACTCGCCGATGGTTAGCCCCGCCGACACGGCGCTATTTAACAATGCTACTTGCCCTGCTTTTAACGCTACTTTGGATTCTGTCGGATCTGCTGGTGGATGGGATTGTATGAAGTGCCTTAAGGCTTCTCCAAGTTGCCGATTCTGTGCTTCTGGATCTAATAAGCTCTTACCTGGAGCATGTTTGATCTCAAGCGACACAACAGAAAAGCAATGTGAAAATAATGAGAGATTATGGTACACAAGGGGGTGCCCAAGCAAATACGGTTTTCTTGCACTAATAGGCCTTGCACTTTACATAATTTTCTTCTCACCAGGAATGGGAACTGTTCCATGGGTTGTGAACTCTGAAATCTACCCTTTGAGGTACAGAGGGATATGTGGTGGAATGGCATCAACTTCAAATTGGGTTTCTAATCTAATTGTTGCTCAGTCCTTTCTGTCACTCACAGATGCTATTGGCACTTCTTGCACTTTCATGATCTTTATATTTATCACCACTGCTGCCATTGTGTTTGTTTTGATCTTTGTTCCGGAAACTAAAGGGCTTCCCATTGAGGCTGTGGAGAAGATGCTTGACAGAAGGACTTTGAACTTCAAGTTTTGGCAGGGGAATCATGATGATGGTGATGATGAAGTAATGAAACAAAAGACTCAGTCAGTTTGA 1761 0.4412 MEGGVPEADVFAFRECLALSWKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKAVDRETWLQEAIVSMALAGAIIGASVGGWINDRFGRRKAIILADTLFFIGSVIMAAATNPAILIVGRVFVGLGVGMASMASPLYISEASPTRVRGALVSLNGFLITGGQFLSYLINLAFTNAPGTWRWMLGVAALPALIQIVLMTMLPESPRWLFRKEREEEAKTILRRIYPPEDVENEINTLKESVEMEIKEASNSDKVSITKMLKTKTVRRGLYAGMGLQIFQQFVGINTVMYYCPTIVQLAGFASNRVALLLSLVTAGLNAIGSIMSIYFIDKTGRRKLLLFSLSGVVVSLVVLTVVFHETTTHSPMVSPADTALFNNATCPAFNATLDSVGSAGGWDCMKCLKASPSCRFCASGSNKLLPGACLISSDTTEKQCENNERLWYTRGCPSKYGFLALIGLALYIIFFSPGMGTVPWVVNSEIYPLRYRGICGGMASTSNWVSNLIVAQSFLSLTDAIGTSCTFMIFIFITTAAIVFVLIFVPETKGLPIEAVEKMLDRRTLNFKFWQGNHDDGDDEVMKQKTQSV* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3072 586 Pfam Sugar (and other) transporter 30 365 IPR005828 GO:0016021|GO:0022857|GO:0055085
Amo13g3072 586 Pfam Sugar (and other) transporter 451 556 IPR005828 GO:0016021|GO:0022857|GO:0055085
Amo13g3072 586 ProSitePatterns Sugar transport proteins signature 2. 128 153 IPR005829 GO:0016021|GO:0022857|GO:0055085
Amo13g3072 586 PANTHER GENERAL SUBSTRATE TRANSPORTER 1 570 - -
Amo13g3072 586 PRINTS Sugar transporter signature 37 47 IPR003663 GO:0016020|GO:0022857|GO:0055085
Amo13g3072 586 PRINTS Sugar transporter signature 123 142 IPR003663 GO:0016020|GO:0022857|GO:0055085
Amo13g3072 586 PRINTS Sugar transporter signature 284 294 IPR003663 GO:0016020|GO:0022857|GO:0055085
Amo13g3072 586 PRINTS Sugar transporter signature 458 479 IPR003663 GO:0016020|GO:0022857|GO:0055085
Amo13g3072 586 PRINTS Sugar transporter signature 481 493 IPR003663 GO:0016020|GO:0022857|GO:0055085
Amo13g3072 586 CDD MFS_HMIT_like 32 544 - -
Amo13g3072 586 Gene3D MFS general substrate transporter like domains 21 390 IPR036259 -
Amo13g3072 586 ProSiteProfiles Major facilitator superfamily (MFS) profile. 29 546 IPR020846 GO:0022857
Amo13g3072 586 SUPERFAMILY MFS general substrate transporter 28 554 IPR036259 -
Amo13g3072 586 Gene3D MFS general substrate transporter like domains 439 564 IPR036259 -
Amo13g3072 586 TIGRFAM SP: MFS transporter, sugar porter (SP) family 22 368 IPR003663 GO:0016020|GO:0022857|GO:0055085
Amo13g3072 586 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 1 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3072 Amo-Chr13 86062454 86068523 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3072 1 585 Organic Solute Cotransporters AT1G30220 68.537 0.0 820
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3072 K08150 - gmx:100783605 952.584