Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2921 ATGTCCACCTCTGATCCCAACAAGTTGATAACCAAAGCTGATAAGCTAACAAAACTCAGTTTCACAAGGTGGACTGCGGATTGGAGAAGTGCTACAGTTCTTTATGAGCAGGCTGCTAATGCATTTAGACTTGCCAAGGACTACGAGAAAGCCAAAACAGCATATGAGAAAGCTTCAAAAGGACAAGAGATGCTTTCTTCACCATGGGATGCCGCTAAGCACATGGAGTCTGCTGCTGCGTTAGCAAAGGAACTAAGCAACTGGAGAGAAGTTGCCGATTTCTATCGTAGGGCATCTGAATTGTACATTGAGTGTGGGAGACCACAGCCTGCATCCGACGCCCTTGCCAAGGGAGCCCGTGCATTGGAAGATACCATGCCTGAAGAAGCCATTCAGCTATATACAGATGCTTGTACAGTTCTTGAAGAGGATGAAAGAGAACAAATGGCATTTGATTTGTATCGTGCTGCAGCCAATGTTTATATAAAACTTGAGAAATATACAGACGCCGCATCTCTCATGTTGAAATTGGGCTTGGCAGCTGAGAAGTCTAATGCTATCAATAGCCAATGCAAGGCATATCTTAGTGCGGTTATTATCTACCTTTATGCTCATGACTTTAAGCAAGCAGAGAAGTGCTACAATGACTGTTCCCAGGTTGATGCTTTCCTCAGCAGCGACCAGAACCGTTGTGCTAGCAAGCTTCTTGCTGCTTACACAGATGGAGATGTTGAAGAAATCAAACGTGTTGCTCAGTCGAGCACTATTTCACATCTTGACCATGTGATCATTAAGCTTGCAAGGAAACTCCCAACAGGCGATGTGAGCGCACTAAAGGGCAGAACTGCTGAAGGGGAAGAAGCACCACTTGATGAAAACGATCTGACATAA 891 0.4489 MSTSDPNKLITKADKLTKLSFTRWTADWRSATVLYEQAANAFRLAKDYEKAKTAYEKASKGQEMLSSPWDAAKHMESAAALAKELSNWREVADFYRRASELYIECGRPQPASDALAKGARALEDTMPEEAIQLYTDACTVLEEDEREQMAFDLYRAAANVYIKLEKYTDAASLMLKLGLAAEKSNAINSQCKAYLSAVIIYLYAHDFKQAEKCYNDCSQVDAFLSSDQNRCASKLLAAYTDGDVEEIKRVAQSSTISHLDHVIIKLARKLPTGDVSALKGRTAEGEEAPLDENDLT* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2921 296 PANTHER GAMMA-SOLUBLE NSF ATTACHMENT PROTEIN 3 283 - -
Amo13g2921 296 Gene3D Tetratricopeptide repeat domain 1 272 IPR011990 GO:0005515
Amo13g2921 296 SUPERFAMILY TPR-like 6 250 IPR011990 GO:0005515
Amo13g2921 296 Pfam Soluble NSF attachment protein, SNAP 5 266 - -
Amo13g2921 296 PANTHER SOLUBLE NSF ATTACHMENT PROTEIN SNAP 3 283 IPR000744 GO:0006886
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2921 Amo-Chr13 66393352 66400244 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2921 K21198 - gmx:100790986 510.76