Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2886 ATGGGTTTCAATTTCAAGTATGTGCTGGTTTTCATTTCTCTGATGTGTGTTTGGTGTGGAAGATTAAGATTCTCTTTGGCTTCTACAGATTCTAGTGATGATGGTTTGGTTAGGTATAATCTAAGAAAGAGGAATTTGGACCGTCAGAGTCTTAGTGCTGCGAGAATCAAGAAGGTTTCTAATGCCGGAGATTTAGGGAGTGACGTTAAAACAGATTCAACTCCTAATGTTGTGTATCTTAAGAATTATCTTGATTCACAGTATTTTGGGGAAATTAGTATAGGTTCACCTCCACAATACTTCAATGTTGTGTTTGACACTGGAAGCTCAAACCTATGGGTCCCTTCTTCCAAATGCATCTTTTCTATTCCTTGCTATTTTCATTCCAAGTACAAGTCAAAGATATCTAGCACCTATACTGAAATTGGCACATCTTGCAAAATCCCTTATGGCCATGGATCCATTTATGGATTCTTCAGCCAAGATGTTGTAAAAGTTGGGGATATCATCATCAAAGAGCAAGTATTCGCTGAAATTACAAAGGAAGGATCATTGGCCCTTTTAGCTTTGCATTATGATGGGATACTTGGACTTGGATTCAAAGATATTTCAATTGGAGAAGTCACACCAGTGTGGTACAATATGATAGATCAAGGGTACATATATCAAAATGTTTTCTCTCTTTGGCTAAATAAAGATCCAATGGCAGAGATAGGGGGTGAGATTGTCTTTGGTGGTATTAACTCGAGACACTTTAGAGGTGAACACACTTATGTTCCAATATCTCAAAAGGGTTACTGGCAGATTGATGTTGGAGATGTTCTACTTGCAAATAGATCAACAGGGTTATGTGAGGGTAGCTGTGCTGCAATTGTGGATTCAGGAATCTCTTCAATTGCTGGTCCAACTACTGTTGTAACTCAAATTAACCATGCCATTGGAGCACAAGGATATGTGAGTCTAGAGTGTAAAAGCATTATCCACAACTATGGTGATAAGATATGGGATGCATTAATCTCCGGGCTAAATCCTGAAATTTTATGTGCCAACATTGGACTCTGTTCGCATGACAAATATCAAAAGGATAATGTTATCGAAACAGTGGTGCATGACGAAAATCTGGATGGTTCAACTTCCAAGGAGAGCCCATTTTGTACTTTTTGCGATATGATTGTCTTCTGGATACAAGTTCAGCTCAAGCAAAGTAATCTGAAGGAGAAAATACTAAAATATGTGGATGAGCTGTGTGAGAAGCTCCCAAGTCCAGAGGGACAAGTATTTGTAGATTGTAATAGTATTGCTGCTATGCCGCATATATCATTCACAATTGGAAACAGATCCTTTCCTCTTTCTCCACAACAGTATGTCCTTAGAGTTGAAGAAGGAAGTTCTAGCGTCTGCTATGGTGGCTTTGTTGCTCTAGATGTGCCGCCACCGCAAGGTCCCCTATGGGTTCTTGGAGATATTTTCTTAGGGAAATATCACACTGTGTTTGACTTTGGTAATCAAAGTATAGGGTTTGCAGAAGCTGCATAA 1536 0.3913 MGFNFKYVLVFISLMCVWCGRLRFSLASTDSSDDGLVRYNLRKRNLDRQSLSAARIKKVSNAGDLGSDVKTDSTPNVVYLKNYLDSQYFGEISIGSPPQYFNVVFDTGSSNLWVPSSKCIFSIPCYFHSKYKSKISSTYTEIGTSCKIPYGHGSIYGFFSQDVVKVGDIIIKEQVFAEITKEGSLALLALHYDGILGLGFKDISIGEVTPVWYNMIDQGYIYQNVFSLWLNKDPMAEIGGEIVFGGINSRHFRGEHTYVPISQKGYWQIDVGDVLLANRSTGLCEGSCAAIVDSGISSIAGPTTVVTQINHAIGAQGYVSLECKSIIHNYGDKIWDALISGLNPEILCANIGLCSHDKYQKDNVIETVVHDENLDGSTSKESPFCTFCDMIVFWIQVQLKQSNLKEKILKYVDELCEKLPSPEGQVFVDCNSIAAMPHISFTIGNRSFPLSPQQYVLRVEEGSSSVCYGGFVALDVPPPQGPLWVLGDIFLGKYHTVFDFGNQSIGFAEAA* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2886 511 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 13 511 IPR001461 GO:0004190|GO:0006508
Amo13g2886 511 SUPERFAMILY Acid proteases 21 510 IPR021109 -
Amo13g2886 511 Pfam Saposin-like type B, region 1 383 420 IPR007856 GO:0006629
Amo13g2886 511 Gene3D Acid Proteases 248 511 IPR021109 -
Amo13g2886 511 SUPERFAMILY Saposin 320 420 IPR011001 -
Amo13g2886 511 Gene3D - 318 420 - -
Amo13g2886 511 PRINTS Pepsin (A1) aspartic protease family signature 290 301 IPR001461 GO:0004190|GO:0006508
Amo13g2886 511 PRINTS Pepsin (A1) aspartic protease family signature 484 499 IPR001461 GO:0004190|GO:0006508
Amo13g2886 511 PRINTS Pepsin (A1) aspartic protease family signature 240 253 IPR001461 GO:0004190|GO:0006508
Amo13g2886 511 PRINTS Pepsin (A1) aspartic protease family signature 94 114 IPR001461 GO:0004190|GO:0006508
Amo13g2886 511 ProSiteProfiles Peptidase family A1 domain profile. 88 508 IPR033121 -
Amo13g2886 511 PANTHER FUNGAL PROTEINASE A, ASPARTIC PROTEINASE SUPERFAMILY PROTEIN 13 511 - -
Amo13g2886 511 Pfam Eukaryotic aspartyl protease 87 510 IPR033121 -
Amo13g2886 511 Pfam Saposin-like type B, region 2 322 354 IPR008138 -
Amo13g2886 511 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 103 114 IPR001969 GO:0004190|GO:0006508
Amo13g2886 511 ProSiteProfiles Saposin B type domain profile. 318 358 IPR008139 -
Amo13g2886 511 Gene3D Acid Proteases 37 246 IPR021109 -
Amo13g2886 511 ProSiteProfiles Saposin B type domain profile. 381 422 IPR008139 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2886 Amo-Chr13 63836948 63841569 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2886 K08245 - gmx:100500551 761.525