Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2791 ATGATCGGAAAGTTGTCGGAGTTGTTAGTCGCCGGAGGCCGCGCCTCTGCAGTTTTGGACACCATAGGGAGTCCAAGAAGCCCTTTGGACATGAACTTGAAGATGCAATCATCATCACCAAAGGGCTTAAAGAGCTATGACCTTGGTGGTGTTGGCCTAGCAATTGTGATGGCACTTGACAAATCCAATTATAACAAAGAAGGTAGTGAGATTTTGCCAAAACATGCCGTTTCTGTTTGTACTACACCAAACAACATGAACCGGTACCGGTCTAGGCCAATCCCGGTTCATAACGAAAAACAACACCAAGATCATCATGAGACTGATGTTCCAAACTCCGAAGATTACACATATGTGACGTATCATATACCTAATAACAAGACCATCACTAAGGTTTACTATGATGGCGGTGAAGAAGGTGCGAATCTAAGACATGGTTACAGGATTAACGACAACAACAACAACTACTTTGGCGTTGGTAGAACAACAACAACAACCACCACCACCCCACCAACACAAAATTTGGTTGTTGAAGGTGAAGCGTCGTTTCCCACATCGGATTTTCTCAGTTCATGTCACCTTTGCAGAAAGAAACTCCATGGCAAAGACATATACATGTACAGAGGAGAGAAAGGATTTTGTAGCCCAGAGTGCCGTTCAAGGCAGATAATGATTGATGAGAGGAAAGAGCTTTGTAGATCAGAAGCTTCAAGATCTGTGGAACTCTCAAGTTCACCATACACAAGGGACCAAATGTTTTCAACTGGGATTATTGCCCTTTAA 783 0.433 MIGKLSELLVAGGRASAVLDTIGSPRSPLDMNLKMQSSSPKGLKSYDLGGVGLAIVMALDKSNYNKEGSEILPKHAVSVCTTPNNMNRYRSRPIPVHNEKQHQDHHETDVPNSEDYTYVTYHIPNNKTITKVYYDGGEEGANLRHGYRINDNNNNYFGVGRTTTTTTTTPPTQNLVVEGEASFPTSDFLSSCHLCRKKLHGKDIYMYRGEKGFCSPECRSRQIMIDERKELCRSEASRSVELSSSPYTRDQMFSTGIIAL* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2791 260 ProSiteProfiles Zinc finger FLZ-type profile. 187 230 IPR007650 -
Amo13g2791 260 PANTHER OS02G0174800 PROTEIN 2 260 IPR044604 -
Amo13g2791 260 PANTHER DUF581 FAMILY PROTEIN 2 260 - -
Amo13g2791 260 Pfam zinc-finger of the FCS-type, C2-C2 181 229 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2791 Amo-Chr13 58942952 58944646 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2791 - - gmx:100801983 308.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2791 13 58942952 58944646 Amo13g2791 13 58942952 58944646 ECH
Amo13g2791 13 58942952 58944646 Amo03g1483 03 38514069 38515284 hybridization