Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2771 ATGGCACCCTACAGTATCTCAAACTATGAAGGAATATATAAGAATGTTCGCCTGCCTGCTCTCATAATTGCAGGGTGTTGTGTGCTTGTAGCTCTAGTGCTTTCCATTCTTCTCATTTGGCAACACCTCCGATCATATACGAATCCCGGAGAACAGAAGTGGATTGTTGCTGTTATTTCTATGGTTCCAATTTATGCTACAGAGTCTATTATATCTTTGTGGAATCCACGTTTATCACTCGCATGCGACATTTTAAGAAACTACTATGAAGCCTTTGCACTGTATTCTTTTGGCAGATATCTGATTGCTTGTCTTGGTGGAGAAGGAAGAGTTGTACAAGTACTTGAACATGAATCTGAAGAACAACTTAGAAAATCCTTGTTGGATGATTCAGATGCCACTCACCACATACAGCAAAGATCATGTTGTAACTTCTTTAGGCGTCCAAGCACACTTGGAAAAGATCTTCTCACCATAGAAAAATTCGGGCTTGTACAATATATGATCCTGAAGACAGTTTGTGCATTCTTAGCATTGGTATTGGAGCTGTGTGGTGTCTATGGTGATGGAGAATTCAAGTGGTACTATGGCTATCCATATATAGCAGTAATATTGAACTTCAGCCAGATGTGGGCATTATTCTGCCTTGTGCAGTTCTATAATGTTACTCATGAGAGGCTTGAACCAATCAAGCCACTAGCAAAATTCATAAGCTTTAAGGCTATAGTGTTCGCTACTTGGTGGCAAGGCGTAGGTATCGCACTACTGTGCACATTTGGAGTTCTACCCAAAGAGGGAAAATTACAAACTGGATTGCAGGATTTTTTAATTTGCATAGAGATGGCAATTGCAGCGATTGCTCATGTTTGTGTATTTTCAGCAAAACCATATCATTATGTTCCTGTTTTTGAACGTGGGGAATTCAGAAAGGAAACAGTAGAAGCAACTTTGAAGATAGAGGAAGGGGGCAAGGAGAAAGAAGCTTTGGTCAAAGAGACAACCACTCAAGTTGAGGCTCCAAGAACAAGCCTCAAAGAGAGTGTGCAGGATATTGTTGTTGAAGGTGGTCAAAGAGTTGTGAAGGATGTTGTATTGACAATCAATCAAGCCATAGGACCTGTGGAAAAGGGAGTGACCAAAATTCAGGAAACATTCCACCACAAAACAGTGGTTTCATCAGATGAGGAGGAAGAAGAATCAGATATACATAAGGAAGTAGTAGAAGAAACTCTTACAGGGGAAGGGGGTGAAATTGCAAGAATGTAA 1266 0.4044 MAPYSISNYEGIYKNVRLPALIIAGCCVLVALVLSILLIWQHLRSYTNPGEQKWIVAVISMVPIYATESIISLWNPRLSLACDILRNYYEAFALYSFGRYLIACLGGEGRVVQVLEHESEEQLRKSLLDDSDATHHIQQRSCCNFFRRPSTLGKDLLTIEKFGLVQYMILKTVCAFLALVLELCGVYGDGEFKWYYGYPYIAVILNFSQMWALFCLVQFYNVTHERLEPIKPLAKFISFKAIVFATWWQGVGIALLCTFGVLPKEGKLQTGLQDFLICIEMAIAAIAHVCVFSAKPYHYVPVFERGEFRKETVEATLKIEEGGKEKEALVKETTTQVEAPRTSLKESVQDIVVEGGQRVVKDVVLTINQAIGPVEKGVTKIQETFHHKTVVSSDEEEEESDIHKEVVEETLTGEGGEIARM* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2771 421 PANTHER TRANSMEMBRANE PROTEIN 184C 19 405 - -
Amo13g2771 421 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 19 405 IPR005178 -
Amo13g2771 421 Pfam Organic solute transporter Ostalpha 21 297 IPR005178 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2771 Amo-Chr13 57935544 57941896 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2771 - - aprc:113852334 656.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2771 13 57935544 57941896 Amo13g2771 13 57935544 57941896 ECH
Amo13g2771 13 57935544 57941896 Amo03g1439 03 36734345 36739866 hybridization