Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2763 ATGGCTTCCAATATTGTGACAATAATTTCAAGCTTTGTTATAGCAGTGATAGTAGCTATCACAGTTCAGATCTTCTACTTCTCACCCATAGATCCACTACCATTGGAGATTCCACCTTCATCTTCAGCTAGACACAACCAATTAAAGAACATAATTAAGCTAGGAGAAGGGGTTCTGAAGGATCCAGAAGATGTTTGTTTTGACAAAGAGGGAACTCTGTATGCTGCTACAAGAGATGGTTGGATTAAAAGATTACCAAGAAATAATGGAGATTGGGAGAATTGGAAGCATATTGATAGTAACACTTTGCTAGGAATCACTCCTTCTAAAGATGGTGGCCTAATCGTATGTGACGCTACAAAGGGTTTATTCAAGGTTACAGAGGATGATGGTTTCACTGTTCTCGTTTCATCACAAGGGAATGGTTCTCAAATCAATTTTGCAGATGATGTGATAGAAGCATCAGATGGAAGTATATATTTCAGTGATGCTAGCAAAAAGTATGGTTTGCAACATGTGCATCTGGATTTGCTAGAGGCAAGACCACATGGACAACTTCTAAAGTACAATCCAACTTCAAATAATGTTGATATTGTCTTGGACAAGCTGTACTTTGCCAATGGAGTTGCACTCTCCAAAGATGAAGATTATCTTCTTCTGTCTGAAACCTGGAAATCCAGGGTTCTGAGGCATTGGCTAAAAGGAGCAAATAAAGGCAAAACAGATATTTTCATTGAAAACCTTCCGGGTGGACCTGATAATATCAATCTAGCTCCTGATGGTTCATTTTGGATAGCTTTGGTTTCGCTAACTAATAATGGATTGGAGTTTATGCACAAATACACGGTAATTAAGCACTTACTAGGTTCATTTCCAAGGTTATATGGCCTTACGAGTGGTGAAACCAAGAAGGCAACAGTGGTCAATGTGGCAACTGATGGCAACATAACCAGAATATTTGGTGATAATGATGGTAGAGTGATTAATTTTGTGACTTCAGCTTTCGAGTTTGAGGATCATCTTTATTTGGGCAGTCTCAATTCCAACTTTGTTGGAAAATTACCTTTGCACAGTGCTTAG 1080 0.3861 MASNIVTIISSFVIAVIVAITVQIFYFSPIDPLPLEIPPSSSARHNQLKNIIKLGEGVLKDPEDVCFDKEGTLYAATRDGWIKRLPRNNGDWENWKHIDSNTLLGITPSKDGGLIVCDATKGLFKVTEDDGFTVLVSSQGNGSQINFADDVIEASDGSIYFSDASKKYGLQHVHLDLLEARPHGQLLKYNPTSNNVDIVLDKLYFANGVALSKDEDYLLLSETWKSRVLRHWLKGANKGKTDIFIENLPGGPDNINLAPDGSFWIALVSLTNNGLEFMHKYTVIKHLLGSFPRLYGLTSGETKKATVVNVATDGNITRIFGDNDGRVINFVTSAFEFEDHLYLGSLNSNFVGKLPLHSA* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2763 359 PANTHER STRICTOSIDINE SYNTHASE-RELATED 10 357 - -
Amo13g2763 359 Pfam Strictosidine synthase-like, N-terminal 46 85 - -
Amo13g2763 359 PANTHER ABC TRANSPORTER PERMEASE PROTEIN-LIKE PROTEIN 10 357 - -
Amo13g2763 359 SUPERFAMILY Calcium-dependent phosphotriesterase 25 356 - -
Amo13g2763 359 Pfam Strictosidine synthase 153 235 IPR018119 GO:0009058|GO:0016844
Amo13g2763 359 Gene3D - 43 358 IPR011042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2763 Amo-Chr13 57600032 57606547 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2763 - - ahf:112790526 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2763 13 57600032 57606547 Amo13g2763 13 57600032 57606547 ECH
Amo13g2763 13 57600032 57606547 Amo03g1431 03 36424457 36425287 hybridization