Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2724 ATGGCGACTGAGAGATACGCTTCTCCCCCTGCCACCTCGGCTGAGGAGAACGCTATGTTCCTTGATATATTGCATGAAGCTCCCCTATTCGCTCACCGCAAGCCTGCAAGGGTTTTTGGCAGTGTTTTCTATTGCATGTTACTGGCAGGTTATGCTACCTTGGCCATAGGAACTGAGTGGATTTTTCGCCCCAAGCAAGAAGTGATCTCTCCCGTGCTTTGTAGTTGCGATGTTCTTCTTTTGCTGTTAACAGGTATCTTTCAACAATATCTAGTTTATCAAGTGCAGAAGATACGGTTACAGGGCTATTATAGTTTCAGCCAGAAGTTGAAATTCATTATTCGCATACCCTTTTCAATTACAGCATATGGAACTGCTGCTATGCTACTTGTTATAGTCTGGAAACCTTACACCGGCTTTTTGTCAATCCCTGCAATATTGAGGATCATTATGGTGGCTGAAGCAGTATGTGCTGGATGTTTCATGAGTCTTTACATTGGTTACATCCATCAGTATAATTCATTGAACTCCCATCCTGATGTTCTCAAGTCCTTATACTCACCACTTCAACCATCAAGTTCTTTGGAGGGTCTAAGGTACCATGATGGTAGACTCTCTGATCAGCAAATGGCTTTGCTACAATATCAGCGTGAGAATCTACATTTCTTGAGTGAGGAGGTTCTTCGGTTGCAAGAGTCCTTAAAGAAATATGAGCGAACTGATGATCGAAGCACACCACAGGTTGATCTTGCCCATCTATTAGCAGCTCGTGACCAGGAATTGCGGACACTTTCTGCAGAGATGAACCAAGTGCAATCTGAGTTAAGGCTTGCGCGGTCCGTGCTTGCTGAGAGGGAGTCAGAGATCCAACATGTTCGTACAACTAACAATCAGTATGTAGAAGAGAATGAAAGACTCCGGGCTATTTTAGCAGAATGGAGCACTCGAGCTGCCAAGCTTGAACGAGCACTGGAGGCTGAGAGGATGTCAAATCTAGAGTTGCAAAGGAAGATTTCCGCGCAATGA 1026 0.4454 MATERYASPPATSAEENAMFLDILHEAPLFAHRKPARVFGSVFYCMLLAGYATLAIGTEWIFRPKQEVISPVLCSCDVLLLLLTGIFQQYLVYQVQKIRLQGYYSFSQKLKFIIRIPFSITAYGTAAMLLVIVWKPYTGFLSIPAILRIIMVAEAVCAGCFMSLYIGYIHQYNSLNSHPDVLKSLYSPLQPSSSLEGLRYHDGRLSDQQMALLQYQRENLHFLSEEVLRLQESLKKYERTDDRSTPQVDLAHLLAARDQELRTLSAEMNQVQSELRLARSVLAERESEIQHVRTTNNQYVEENERLRAILAEWSTRAAKLERALEAERMSNLELQRKISAQ* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2724 341 PANTHER TRANSMEMBRANE PROTEIN 192 1 339 IPR029399 -
Amo13g2724 341 Pfam TMEM192 family 67 235 IPR029399 -
Amo13g2724 341 Coils Coil 220 240 - -
Amo13g2724 341 Coils Coil 254 281 - -
Amo13g2724 341 Coils Coil 296 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2724 Amo-Chr13 56001945 56008876 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2724 - - adu:107479130 642.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2724 13 56001945 56008876 Amo13g2724 13 56001945 56008876 ECH
Amo13g2724 13 56001945 56008876 Amo03g1385 03 34047443 34054288 hybridization