Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2672 ATGGATAAAGGTCTTGCTAATGAAGAGACTGTTAATTTGCGAAACGGAGTCGAATTGGCCACATCAGTCTCTGATAAACATGTTAATCTTTTGAGGCCAAGTGTACCAAGTTATCCAATTTTTAGAGCTCAAGCGCCAGATGACACAGAGCAAGAAAAGGGAAAATATTATTTGATTAGAGATCCAGAGGACTTGCAAATTGGACTTTATGACAAACCCCTTCCATGTTTTGGCTGCGGAATTGGATGGTTCTCATTCCTTTTAGGATTTGTATGTCCACCTCTGTGGTACTTTGCAACAATTCTCTATTTCAGAAATTACTATCGAAAGGATCCTAGGGAAAGGGCTGGTCTTGGAGCCTCCGCAATTACAGCATTATTGTGCACCGTAGCATTGCTAATCATAGCAGCTATTCTTCTGTTGCGGTCCCTTTAA 435 0.4092 MDKGLANEETVNLRNGVELATSVSDKHVNLLRPSVPSYPIFRAQAPDDTEQEKGKYYLIRDPEDLQIGLYDKPLPCFGCGIGWFSFLLGFVCPPLWYFATILYFRNYYRKDPRERAGLGASAITALLCTVALLIIAAILLLRSL* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2672 144 PANTHER 60S RIBOSOMAL L18A-LIKE PROTEIN 45 140 - -
Amo13g2672 144 PANTHER 60S RIBOSOMAL L18A-LIKE PROTEIN 45 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2672 Amo-Chr13 53715619 53720679 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2672 - - aip:110265894 250.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g2728 01 98066087 98068956 Amo13g2672 13 53715619 53720679 PCT
Amo13g2672 13 53715619 53720679 Amo01g2728 01 98066087 98068956 PCT