Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2667 ATGGAGTGCCTTGGAGCGAGAAACTTCGCGGCAATGTCGGTTTGTTTAAGCTCTTCTTCGAGGTCGCGTTTGAGGAGGAAGAAGCTAGCCAGAATCCGAACCTCAATCTGCATTCGTGGAATTAGTTTGCACCGTCATCACCACCATGATGATGATCATTATCGTGAAGCTTCACGCTCGCAATGTCTCAGCGTGGAGGCCAAAGCTGGTGCCGGAAGCGAGAGCTGCGTGGCGACGAAGGAGGACTTCGCCGACGAAGAAGATTATATCAAGGCCGGTGGATCGGAACTCGTGTTCGTCCAAATGCAGCAGAACAAGTCCATGGAAATGCAATCCAAGCTTGCTGATAAGTTGCCACCCATATCTGTAGGAGATGTATTGGATCTAGTGGTGATTGGTTGTGGTCCGGCTGGTCTTGCTCTTGCTGCAGAATCTGCCAAGTTAGGATTGAAAGTGGGGCTCATTGGTCCGGATCTTCCTTTTACAAATAATTATGGTGTGTGGGAAGATGAATTTAAAGATCTTGGACTTGGAGGTTGTATTGAGCATGTTTGGAAGGATACCATTGTATATCTTGATAATAAGGATCCCATTTTTATTGGACGTTCTTATGGACGTGTCAGTCGACATTTGCTTCATGAGGAATTGTTAAGAAGGTGTGTCGAGTCAGGTGTATCATATCTTAGCTCAAGAGTTGAAAGGATTGTTGAGGGTAGCAATGGCCACAGTAATGTCATMTGTGAATATGATATTGTGGTGCRCTGCAGGCTTGCTACTGTTGCATCAGGAGCAGCTTCAGGGAAACTATTGCAGTATGAAGTTGGGGGTCCAAAGGTGTCTGTCCAGACAGCTTATGGTGTGGAAGTTGAGGTGGAAAACAGTCCTTATGATCCCAACCTGATGGTTTTCATGGATTACAGAGACTACATGAAGCAAAATGTTCAAACTCTAGAAGCAAATTACCCAACATTTCTTTATGCAATGCCCATGTCTGGCACAAGAGTGTTCTTTGAGGAAACCTGTTTGGCGTCGAAAGATGCCATGCCTTTTGAGTTATTAAAGAAAAAGCTTTTTTCGAGATTAAATACAATGGGGATCCGAATTACAAAGACTTATGAAGAGGAATGGTCTTATATCCCCGTTGGTGGGTCCCTACCCAACACAGAGCAGAAGAACCTTGCATTTGGTGCAGCTGCTAGTATGGTGCATCCAGCTACAGGCTACTCAGTTGTGAGATCTTTGTCGGAAGCTCCAAAATATGCTTCAGTAATTGCCTCTATTTTGAAAGAGGGTCATACAAGTAGCATTATTACTCATGAACGAAGTAAAGAGAATCTATCTATGCAAGCTTGGAATACCCTTTGGCCACAAGAAAGGAAACGACAGAGAGCATTCTTTCTTTTTGGATTAGCATTAATTCTGCAGCTTGACATTGAGGGCATCAGAACCTTCTTTCATACTTTCTTTCGCTTACCTAAYTGGATGTGGCAAGGATTTCTTGGCTCCTCTCTCTCCTCTACAGACCTAGTACTATTTGCATTCTACATGTTCATAGTAGCACCAAATAACTTGAGAATGTGCCTAGTCAGACATCTGCTTTCGGATCCTACAGGGACAACAATGGTAAGGACCTACTTAACGATATAG 1647 0.4384 MECLGARNFAAMSVCLSSSSRSRLRRKKLARIRTSICIRGISLHRHHHHDDDHYREASRSQCLSVEAKAGAGSESCVATKEDFADEEDYIKAGGSELVFVQMQQNKSMEMQSKLADKLPPISVGDVLDLVVIGCGPAGLALAAESAKLGLKVGLIGPDLPFTNNYGVWEDEFKDLGLGGCIEHVWKDTIVYLDNKDPIFIGRSYGRVSRHLLHEELLRRCVESGVSYLSSRVERIVEGSNGHSNVICEYDIVVXCRLATVASGAASGKLLQYEVGGPKVSVQTAYGVEVEVENSPYDPNLMVFMDYRDYMKQNVQTLEANYPTFLYAMPMSGTRVFFEETCLASKDAMPFELLKKKLFSRLNTMGIRITKTYEEEWSYIPVGGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEAPKYASVIASILKEGHTSSIITHERSKENLSMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFHTFFRLPNWMWQGFLGSSLSSTDLVLFAFYMFIVAPNNLRMCLVRHLLSDPTGTTMVRTYLTI* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2667 548 TIGRFAM carotene-cycl: lycopene cyclase family protein 128 527 IPR010108 GO:0016117|GO:0016705
Amo13g2667 548 SUPERFAMILY FAD/NAD(P)-binding domain 127 521 IPR036188 -
Amo13g2667 548 Gene3D - 126 491 IPR036188 -
Amo13g2667 548 PANTHER BNAC09G53690D PROTEIN 1 494 - -
Amo13g2667 548 PANTHER - 1 494 - -
Amo13g2667 548 Pfam Lycopene cyclase protein 128 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2667 Amo-Chr13 53410970 53416472 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2667 K06444 - gmx:100790686 902.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2667 13 53410970 53416472 Amo13g2667 13 53410970 53416472 ECH