Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2555 ATGGCGGCATCTGCGAGATTCACGGCGGCAATGGTAGTGCTAGCTCTAGGAACTTCTCTCTTCCATTGCACCGAAGCTTCAGCTCCTTCTGTGGGTGAGTTCGTCCACACCACCATCAATTCTCACACTGTCGTTATCTTCTCCAAGTCCTATTGCCCGTACTGCAGAAGAGCAAAGTCTGTTTTTAAAGAGTTGAACCAGGACGCACATGTTGTTGAGCTTGATGAGAGAGATGATGGCTCAAAGATTCAGGATATCTTGAATAATATCGTTGGAAGGCGAACCGTCCCACAAGTTTTCATCAACGGAAAGCACCTTGGCGGCTCAGATGATACTGTCGAAGCTTATGAGAGTGGCCGTCTGGCTAAGCTTCTTGGAATTGAGACGAAGGGTCACGATGATCTCTGA 408 0.4804 MAASARFTAAMVVLALGTSLFHCTEASAPSVGEFVHTTINSHTVVIFSKSYCPYCRRAKSVFKELNQDAHVVELDERDDGSKIQDILNNIVGRRTVPQVFINGKHLGGSDDTVEAYESGRLAKLLGIETKGHDDL* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2555 135 ProSitePatterns Glutaredoxin active site. 46 61 IPR011767 -
Amo13g2555 135 Gene3D Glutaredoxin 21 126 - -
Amo13g2555 135 SUPERFAMILY Thioredoxin-like 33 125 IPR036249 -
Amo13g2555 135 PANTHER BNAA02G04900D PROTEIN 1 122 - -
Amo13g2555 135 TIGRFAM GRX_euk: glutaredoxin 44 125 IPR011899 -
Amo13g2555 135 Pfam Glutaredoxin 44 105 IPR002109 -
Amo13g2555 135 PRINTS Glutaredoxin signature 44 62 IPR014025 -
Amo13g2555 135 PRINTS Glutaredoxin signature 89 102 IPR014025 -
Amo13g2555 135 PRINTS Glutaredoxin signature 103 116 IPR014025 -
Amo13g2555 135 ProSiteProfiles Glutaredoxin domain profile. 32 132 - -
Amo13g2555 135 CDD GRX_GRXh_1_2_like 44 124 - -
Amo13g2555 135 PANTHER GLUTAREDOXIN 2 1 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2555 Amo-Chr13 47201583 47206176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2555 33 125 Miscellaneous Gene Families AT4G15700 32.258 3.72e-11 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2555 K03676 - gmx:100777703 190.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2555 13 47201583 47206176 Amo03g1131 03 25686676 25690269 hybridization