Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2543 AGGACAATGTTTAGCTTTTTAACAAGGAAAGATGTGAGAAAGATTCTCAAGCGTAAAGACAGTGATGCTGGTGAAAAAGGAAGAGCTCTGGAAGAATTGAGAGCCTCTCTATTTAACGAATTTCGTTCCTCCGAAGGTGCAAAACGTCAGCAGCAACGTATTTGTGGTCCAATTAGTGCACTTTCCTTCAACTTTCTGGTTGCAGTTGGTATTATTTTCATGAACAAAATGGTACTTCAAACTGTTAAATTCAAATTCCCCATACTTCTTACACTAATCCATTATTTAGTAAGCTGGTTCTTGATGGCTGTTCTTAAAGCATTTTCTATCCTTCCTTCATCTCCTTCATCAAAATCAACTCGGATGTCTACTTTATTTACTCTTGGATTTGTTATGTCACTCTCAACTGGCTTTGCTAATGTCAGCTTGAAGTATAACAGCATTGGTTTCTATCAGATGGCAAAGATTGCAGTGACACCGTCAATAGTTTTGGCAGAATTTGTATTGTACAGAAAAAAAGTTTCTTTGCCCAAGGCTATAGCATTAACGGTGGTATCTATTGGTGTTGCTGTGGCTACGGTGACTGATCTGCAGTTCCATTTTTTTGGTGCATGTGTGGCATTGGCATGGATTGTACCGAGTGCTGTAAATAAAATCCTCTGGTCTCGGCTGCAGCAACAAGAGAACTGGACAGCTTTGTCTCTGATGTGGAAAACAACACCTATAACATTGATTTTCCTGGCTGCTATGATGCCTTGCTTAGACCCTCCTGGTGTCCTTTCCTTTGATTGGAACTTCGGAAACACACTCGTGATTTTTGGCTCGGCAATTCTTGGATTCTTGCTTCAGTGGTCTGGTGCTTTAGCATTAGGTGCTACATCTGCCATCTCCCATGTTGTACTTGGGCAGTTCAAGACATGTGTAATCCTTCTAGGAAACTATTATCTTTTTGGATCGAATCCCGGCGCAATCAGCATCTTCGGTGCATTCACAGCTATTGCCGGCATGTCTGTCTACACTTACCTTAATATGAGACCACAACCAAACAAGGTAACCCCTTGGCAGGCTTCCACTTTTCCGAAATCCAAACTCGGCAAAGAAAATGGCGGCACTCACGATGAACATTACGGGGCGGAGTCCGTCTAA 1146 0.4206 RTMFSFLTRKDVRKILKRKDSDAGEKGRALEELRASLFNEFRSSEGAKRQQQRICGPISALSFNFLVAVGIIFMNKMVLQTVKFKFPILLTLIHYLVSWFLMAVLKAFSILPSSPSSKSTRMSTLFTLGFVMSLSTGFANVSLKYNSIGFYQMAKIAVTPSIVLAEFVLYRKKVSLPKAIALTVVSIGVAVATVTDLQFHFFGACVALAWIVPSAVNKILWSRLQQQENWTALSLMWKTTPITLIFLAAMMPCLDPPGVLSFDWNFGNTLVIFGSAILGFLLQWSGALALGATSAISHVVLGQFKTCVILLGNYYLFGSNPGAISIFGAFTAIAGMSVYTYLNMRPQPNKVTPWQASTFPKSKLGKENGGTHDEHYGAESV* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2543 381 MobiDBLite consensus disorder prediction 366 381 - -
Amo13g2543 381 Pfam Triose-phosphate Transporter family 65 339 IPR004853 -
Amo13g2543 381 PANTHER SOLUTE CARRIER FAMILY 35 17 358 - -
Amo13g2543 381 MobiDBLite consensus disorder prediction 362 381 - -
Amo13g2543 381 PANTHER NUCLEOTIDE-SUGAR TRANSPORTER FAMILY PROTEIN 17 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2543 Amo-Chr13 46558331 46563156 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2543 69 364 Organic Solute Cotransporters AT1G77610 25.081 7.20e-23 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2543 - - gmx:100777499 671.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2543 13 46558331 46563156 Amo13g2543 13 46558331 46563156 ECH