Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2425 ATGTTGGAAGGGAAAGGTATGGTGAAAGAAACTGACATGCCGTTGAAGATGCAAATCCAGGCCATGGCATGTGCTTCTAAGGCCCTTGACCTTTATGATGTTCATGATTGCATCTCTATTGCTGCTCACATCAAGAAGGAATTTGATAAGGTGTATGGAATGGGATGGCAATGTGTGGTGGGTTTCAATTTTGGGTGCTTCTTCACCCATTCACCTGGCACTTTCATCTATTTTGCTCTTGAGACCCTTAATTTCCTTATATACAAGGGAACCTCCTCTGATCTCTCTTCCCTTTCTGTAACATAG 306 0.4281 MLEGKGMVKETDMPLKMQIQAMACASKALDLYDVHDCISIAAHIKKEFDKVYGMGWQCVVGFNFGCFFTHSPGTFIYFALETLNFLIYKGTSSDLSSLSVT* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2425 101 PANTHER DYNEIN LIGHT CHAIN 1 92 - -
Amo13g2425 101 PANTHER DYNEIN LIGHT CHAIN 1 92 IPR001372 GO:0007017|GO:0030286
Amo13g2425 101 SMART Dynein_light_2 1 90 IPR001372 GO:0007017|GO:0030286
Amo13g2425 101 SUPERFAMILY DLC 2 89 IPR037177 GO:0007017|GO:0030286
Amo13g2425 101 Pfam Dynein light chain type 1 7 89 IPR001372 GO:0007017|GO:0030286
Amo13g2425 101 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 3 90 IPR037177 GO:0007017|GO:0030286
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2425 Amo-Chr13 42632842 42633454 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2425 K10418 - zju:107431806 175.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2425 13 42632842 42633454 Amo13g2425 13 42632842 42633454 ECH
Amo13g2425 13 42632842 42633454 Amo03g0143 03 2640930 2644827 hybridization
Amo07g2362 07 70413998 70417514 Amo13g2425 13 42632842 42633454 PCT
Amo13g2425 13 42632842 42633454 Amo07g2362 07 70413998 70417514 PCT