Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2306 ATGCTCCTTCAGCTTAATCTTCTTCATCTTCCTTACTACCACCAACCTTCCCTTCCGAACTCGATAATCCTTAAACTCCTCACTCCACCAATTTCTTCTCTTCCTCAATCCTTCCCTCGAACCGGTTCCGGTCGGCGAGCGAGTCTTTCGGCTTGCCACAGTTTGGGTTCACCGGTTTTCTCGTTGCCGGAGGATGAGTTGGACGTGGAGCTGGGTCGGCTTCTGGCGCTGTTGCCGGAGGAGATGCGGCGGCGGGTCAGTGATCACCCGGAGCTGCACCAGCTGATGGAGGTGGTCATGGATTTGGGTCGGAAACCACTGGCTAGGTTTCCGTCCGGTGATTTCGTGATTTCGGAGTTTCCAATAACGGTTCAGGATATCGAGCACGCTACGGCACAGGTTGGTGATTTTGCTATTGATAATCGAGCTGGAATCAGTAGGACTTTACACCGGATTAGTGCTATCAGAAACCGTAAGGGGGCAATCATTGGCCTAACTTGTCGAGTTGGCAGGGCAATTTCTGGGAGTGCTAAATTGTTGCAAGATTTGGTTCAAGATGGGGCTTCTTTGTTGCTTATTGGGCCTCCTGGAGTAGGAAAAACTACAATTATTAGGGAAATAGCTCGGATGTTAGCAAATGATTATAAGAAGCGTGTGATGATAGTTGACACCTCCAATGAGATTGGTGGTGATGGGGATATACCACATGCTGGAATAGGCAGTGCTCGACGTATGCAAGTCCCCAACGCTGATATGCAACATAAGGTATTAATAGAAGCAGTTGAAAACCACATGCCACAAGTGATTGTAATAGATGAAATTGGTACAAAACTTGAAGCAATGGCTGCTAGTACTATCGCACAGCGTGGAATCCAGCTTGTTGCCACTGCTCATGGAGTCACAATTGAGAACCTAATAATGAATCCTTCATTAGAGATGCTAGTCGGAGGAGTACAGAGTGTGACACTGGGGGATGAAGAGGCCAGTCGCAGGGGTGTCCAGAAGACTGTGTTAGAGAGGAAAGGGCCATCAACATTTAGTTCTGGAGTGGAAATTATCTCCAAGACACAGCTGAGGATTCATCGTAGCCTTGAAGCAACTGTTGATGCTATTCTTTCTGGTAATTTTTCTTCATGGCAAAGTAATTGGTTGTGGATTGATTTATGA 1167 0.4713 MLLQLNLLHLPYYHQPSLPNSIILKLLTPPISSLPQSFPRTGSGRRASLSACHSLGSPVFSLPEDELDVELGRLLALLPEEMRRRVSDHPELHQLMEVVMDLGRKPLARFPSGDFVISEFPITVQDIEHATAQVGDFAIDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAISGSAKLLQDLVQDGASLLLIGPPGVGKTTIIREIARMLANDYKKRVMIVDTSNEIGGDGDIPHAGIGSARRMQVPNADMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLVGGVQSVTLGDEEASRRGVQKTVLERKGPSTFSSGVEIISKTQLRIHRSLEATVDAILSGNFSSWQSNWLWIDL* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2306 388 CDD AAA 187 276 - -
Amo13g2306 388 Gene3D - 168 332 IPR027417 -
Amo13g2306 388 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 64 374 - -
Amo13g2306 388 SMART AAA_5 186 317 IPR003593 -
Amo13g2306 388 Pfam Sporulation stage III, protein AA 165 316 IPR045735 -
Amo13g2306 388 PANTHER KINASE-RELATED 64 374 - -
Amo13g2306 388 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 73 329 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2306 Amo-Chr13 39709143 39719830 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2306 - - gmx:100807394 605.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2306 13 39709143 39719830 Amo13g2306 13 39709143 39719830 ECH