Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2279 AGTTTGGGTTGGGATGTGGTAGTTGTGGAAGCAGTGGATGCCTTGCATTCGGAGTTCAGGGCTGTGGATTATTTGGTTGCATTCAATAGCACCCGTGTACTAAAGGCATTCCAGAATGCTCGACTTGGATCTCATCACTTTGGTGGTTGCACTGGTTATGGCCAYGATGAAGCTGGGGGGCGAGAGGCTCTTGACCAGGCCTTTGCTGAAATTTTTGGGGCTGAATCTGCTATTGTGCGATCACAGTTCTTCTCAGGTACTCATGCTATCACATGTGCTTTATTTGCTCTCCTAAGGCCTGGGGATGAGTTATTGGCAGTTGCCGGCGCACCATATGATACTCTAGAGGAAGTAATTGGGAAAAGGGACTCTGGTGGACTAGGTTCCCTCCAAGATTTTGGGGTGAAGTACAGAGAAGTTCCACTTGCTGAGGATGGTGGACTTGACTGGAATGCATTGACAGTTTCTGTCAAGCCCGGAACAAAATGTGCACTCATACAGAGGTCATGTGGTTATTCATGGCGTCAGAGTTTGAGTGTTAACGACATAGGAAGGGCAATAAAAATAATCAAAATGCAAAACCCTGGATGCTTAGTCATGGTGGACAACTGCTACGGAGAATTTGTTGAGAGCATTGAACCTCCCATGGTGGGTGCGGATTTGATTGCTGGCAGTTTGATAAAGAATCCTGGTGGAACAATTGCACCATGTGGTGGATATGTTGCTGGGAAAAGGAAATGGGTTGAAGCAGCTGCTGCGCGGCTTTCTGCTCCTGGGCTTGGGGTGGATTGTGGTTCAACCCCTGGTGATATCATGCGAGCCTTTTTCCAAGGATTGTTTCTTTCTCCCCAGATGGAGAGATTGTGTTTGTCTTTGTTAGCATCTAAAGGCTATAAAGTGCAACCACTCCCTCGTGTACCTCGCCATGATACAGTTCAGGCTGTACAGCTTCGAAGTCGTGAGCATCTCCTTGCTTTCTGCGAGGCTGTTCAGAGAAGCTCTCCTGTTGGTTCGTATACCAAACCAGTTGCTGGTACCACTCCTGGATATGCATCAGAGGTAATATTTGCCGATGGAACCTTTATTGATGGGAGCACCAGTGAACTTTCATGTGATGGACCTCTTAGAGAACCATTTGCCGTATTTTGCCAAGTAATCATACATTGA 1167 0.4704 SLGWDVVVVEAVDALHSEFRAVDYLVAFNSTRVLKAFQNARLGSHHFGGCTGYGHDEAGGREALDQAFAEIFGAESAIVRSQFFSGTHAITCALFALLRPGDELLAVAGAPYDTLEEVIGKRDSGGLGSLQDFGVKYREVPLAEDGGLDWNALTVSVKPGTKCALIQRSCGYSWRQSLSVNDIGRAIKIIKMQNPGCLVMVDNCYGEFVESIEPPMVGADLIAGSLIKNPGGTIAPCGGYVAGKRKWVEAAAARLSAPGLGVDCGSTPGDIMRAFFQGLFLSPQMERLCLSLLASKGYKVQPLPRVPRHDTVQAVQLRSREHLLAFCEAVQRSSPVGSYTKPVAGTTPGYASEVIFADGTFIDGSTSELSCDGPLREPFAVFCQVIIH* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2279 388 Gene3D - 5 55 - -
Amo13g2279 388 PANTHER - 8 386 IPR009651 -
Amo13g2279 388 Gene3D - 265 388 - -
Amo13g2279 388 Pfam Methionine gamma-lyase 9 384 IPR009651 -
Amo13g2279 388 SUPERFAMILY PLP-dependent transferases 19 336 IPR015424 -
Amo13g2279 388 Gene3D - 56 264 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2279 Amo-Chr13 38968322 38973947 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2279 - - gmx:100809166 694.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2279 13 38968322 38973947 Amo13g2279 13 38968322 38973947 ECH