Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2259 ATGGCGAGACTGAAGATTAGAGGGACCTGGTCGGGGGTTCTGGAAGACGTCACCGTCGACGCCTGGACCGTACCAAAGCTCCGGGAAGAGGTGGCCATGCGCGCCAACTGCTCCCCTGACTGCATCAACCTCACATTCGCCGGCATGWTCCTCAAGGACKACGATGCCGATGCCGGCWACGTYAGAAACTTGGCCAGTCTGGGCGTCAAGATCAACTCTAAGATCTTCGCCTCTCGCATCTCTCCTCAAGAAAGCGACGCATTCAGAAGAGAAGAAGAAYTTTTTAGTAGGCTTGAGGAAATCAGGGCAGCTGCAATTGTGATGGCGGAAAAGCATCCATGTTTAATACCTGTTGAGGACTTCAACAGAGACGCTGAAGATCAAAGTGGAGAGTTAGTGCATATAAGTTCTGAGATGGAGCATAGGGCAGTAATGATGGGAGTGAGGCTTCATGCAATAGCGGTGAGGCTTATTGGATGTGAACTTTACAATAGTGCAGTAGAAGCGCTTAGCTTAGGAGAGGAGGCATTCTCAATTTGTGATCCAAATCTCATTAAGCTTATTTATATTGTTCCGATTCTGCACATAAACATGGTGTGGTGCTACTTTATGAAAGGAGACATCAGGTTGCTCTCGGATGCAGGAAAGCRTCTTGAGATAGCTAGRACAGGAATTGAACGCGATCAAGTGAAGAAATCTGTTTGCCGCAGACSAYTAGAAAAACTGCATTTGAGACTAGATTTGCTTGAAGGGGTTGTGGCATATCATAGTGGCCAGATAGAGAAATCAAGAAAAGCATTACTTTCTGCAAAAGTAAAATTTATCCAGCATCAAGGCCCGGTTGACCCCATAATGCTTCTTATGAGCTTTGATGATGCAAGGTTTGGCTTCACCCAAAAGGAAGCAAATAGAGCACTGAAAATGTGTAATGGAGATGTGGGGGTTGCCATTGACTTCCTTATTGAGGAAGAAATAAAGGAAGTGCAAAAATGCAATGATGATAGCCAGAGAAGAAAGAAATTTTGGTGGGTATTTCTATGTTTCTTGATAGCTTCCTTCGTCAGAGAGGGAAAGCTGTACGGGTTGACACCTTCAAATAAAGTTGTGAATATAAAGAGATTGAAAGCATTGGTTTCCTTTGGGCGAGTTTGTCCACTAGCTAATAGTATATTTGTCCTATTTGATACTGCTAAATATAGCAGGGTTGACGAGGAGCTTGCGGCTGAAGCCCTTAAAAGAAATGAAAATGATAAGCAGAAAGCATTGGATGATTTAAAAAATCCAGAAACTATTTCTACTTTACAGGCTGATATTGAGTCCATGAAAAGAGAGAGACAGAAACAAGWAACAGATTTTGCAATTGAAAAAGCTGTACAAATGGGTTTTGAAAGATCAAGAGTGGTTGCTGCTTTTGAGGCTGGTGGCACTTCAGAAGAAGTAATCCAAAGACTGAAAGTGCAACCGGAAGGTCCATCAGATATCAGCAAAGCAGAGGAGCAAAATGAGGAAATAAAAGGCGAGCTCTCTGCAGATATAGAAATTGCAAATGAAGGACCAGTCATTATTTTTTACTTGCGTTCGGTAGAGCTTGCATTGAGGAGGCTCTGGGAAGAAGACGTTCCTTCCCAGCATGATGAAAAAAAAGAAGGATACAAGTTTATGTAA 1665 0.4282 MARLKIRGTWSGVLEDVTVDAWTVPKLREEVAMRANCSPDCINLTFAGMXLKDXDADAGXVRNLASLGVKINSKIFASRISPQESDAFRREEEXFSRLEEIRAAAIVMAEKHPCLIPVEDFNRDAEDQSGELVHISSEMEHRAVMMGVRLHAIAVRLIGCELYNSAVEALSLGEEAFSICDPNLIKLIYIVPILHINMVWCYFMKGDIRLLSDAGKXLEIARTGIERDQVKKSVCRRXLEKLHLRLDLLEGVVAYHSGQIEKSRKALLSAKVKFIQHQGPVDPIMLLMSFDDARFGFTQKEANRALKMCNGDVGVAIDFLIEEEIKEVQKCNDDSQRRKKFWWVFLCFLIASFVREGKLYGLTPSNKVVNIKRLKALVSFGRVCPLANSIFVLFDTAKYSRVDEELAAEALKRNENDKQKALDDLKNPETISTLQADIESMKRERQKQXTDFAIEKAVQMGFERSRVVAAFEAGGTSEEVIQRLKVQPEGPSDISKAEEQNEEIKGELSADIEIANEGPVIIFYLRSVELALRRLWEEDVPSQHDEKKEGYKFM* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2259 554 SUPERFAMILY UBA-like 295 336 IPR009060 GO:0005515
Amo13g2259 554 Coils Coil 450 451 - -
Amo13g2259 554 Coils Coil 431 448 - -
Amo13g2259 554 PANTHER NEDD8 ULTIMATE BUSTER-1 BS4 PROTEIN 404 502 IPR039749 -
Amo13g2259 554 PANTHER NEDD8 ULTIMATE BUSTER-1 BS4 PROTEIN 21 381 IPR039749 -
Amo13g2259 554 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 296 323 IPR015940 -
Amo13g2259 554 Gene3D - 293 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2259 Amo-Chr13 38562349 38567713 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2259 - - adu:107478345 791.186