Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2217 ATGCCTGAGGCTCCGAAAGACTACAACCTCGTAGAACAGAACAGGAAGATCCTCGAGTTCATCGAGGATGTGACTTCCAACGCCGACCAAGTCCAGCAGAAGGTCCTCTCCGAAATCCTCTCCCGCAATGCAAACGTCGAGTACCTCCGGCGACACGGCCTCAACGGCCAAACTGACCGCGACACCTTCAAAAAACTACTCCCTGTCATTTCCTACGAGGACCTCCAGCCCGATATCAATCGTATCGCCAATGGCGATACCTCCCCAATTCTTTGCTCTAAGCCCATTTCAGAGTTCCTCACAAGTTCCGGAACATCGGGTGGTGAGAGGAAGCTGATGCCTACAATTGAAGAAGAACTGGGAAGGAGGAGCTTGCTGTATAGCTTACTGATGCCGGTTATGAGCCAGTTTGTTCCTGGCTTAGAAAACGGCAAAGGAATGTACTTAATGTTCATAAAAGCCGAGGCCAAAACACCCTCAGGGATCGTGGCTCGTCCCGTTTTAACGAGCTACTACAAGAGCTCATACTTCAGGGACAGACCTTATGACCCGTACACAAACTACACCAGCCCAAACGAGACCGTACTCTGTCCAGACTCTTACCAAAGCATGTATTCCCAATTGCTCTGTGGCCTTTGCCAGAACAAAGAGGTGCTCCGAGTGGGAGCGGTTTTCGCCTCCGGCTTCATCCGGGCGATTCGCTTCCTGGAGAAGCATTGGACCCTTCTTTGCAATGACATAAGAACAGGAAGCGTGAACGCCGAGATCACGGACGTTTCGGTCCGCGAGGCGGTTATGAAGATCCTGAAACCCGACCCGAAATTGGCGGATTTCATCGAGGCGGAGTGCGGGAAGAAATCTTGGCAGGGAATCATCACTAGGCTGTGGCCCAACACAAAGTATGTGGATGTTATTGTGACTGGGACAATGTCACAGTACATTCCCACATTGGATTACTATAGCAATGGTTTACCACTCGTGTGCACCATGTATGCCTCTAGCGAGTGCTACTTTGGTGTTAACCTTACCCCTCTTTGCAAGCCTAGTGAGGTTTCCTACACTCTTATTCCCACCATGTGCTACTACGAGTTCCTTCCCGTCAACAGAACCAACTCCGACCACAGCGATTCTCTCTCCGACAAGGAACAGCAAGACCTCGTTGAACTCGTTGATGTCAAGGTCGGCCAGGAATACGAGCTAGTTGTCACAACATACGCCGGACTATACCGCTACAGAGTGGGTGATGTGCTGAGGGTGGCCGGATTCAAGAACAAGGCCCCACAATTCAACTTCGTCTGCAGAAAGAACGTAGTCCTCAGCATAGATTCCGACAAGACAGACGAAGTGGAGCTCCAGAACGCAATGAAGAACGCCGTGACTCACCTCGTCCCGTTCGACGCCACCGTGTCGGAATACACAAGCTACGCAGACACAACAACAATCCCAGGCCACTACGTCCTCTACTGGGAGCTAACTCTCAACGGAACAACCCAAATTCCACCCTGCGTCTTCGAGGATTGTTGCTTAGCCATTGAAGAATCGCTCAACAGCGTTTACCGCCAGGGACGAGTCTCCGACAAGTCGATTGGGCCGCTGGAAATCAAGATCGTCGAACAGGGGACTTTTGATAAGCTTATGGACTATGCCATTAGCTTAGGCGCTTCCATAAATCAGTACAAGACTCCAAGGTGCGTGAAATTTGCACCTGTTGTGGAGCTTTTGAACTCAAGGGCAACTTCAACCTACTTTAGTCCCAAGTGTCCAAAATGGGTTCCAGGCCACAAGCAGTGGATCAATAACAATAATCAGAATTGA 1815 0.5047 MPEAPKDYNLVEQNRKILEFIEDVTSNADQVQQKVLSEILSRNANVEYLRRHGLNGQTDRDTFKKLLPVISYEDLQPDINRIANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEEELGRRSLLYSLLMPVMSQFVPGLENGKGMYLMFIKAEAKTPSGIVARPVLTSYYKSSYFRDRPYDPYTNYTSPNETVLCPDSYQSMYSQLLCGLCQNKEVLRVGAVFASGFIRAIRFLEKHWTLLCNDIRTGSVNAEITDVSVREAVMKILKPDPKLADFIEAECGKKSWQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGVNLTPLCKPSEVSYTLIPTMCYYEFLPVNRTNSDHSDSLSDKEQQDLVELVDVKVGQEYELVVTTYAGLYRYRVGDVLRVAGFKNKAPQFNFVCRKNVVLSIDSDKTDEVELQNAMKNAVTHLVPFDATVSEYTSYADTTTIPGHYVLYWELTLNGTTQIPPCVFEDCCLAIEESLNSVYRQGRVSDKSIGPLEIKIVEQGTFDKLMDYAISLGASINQYKTPRCVKFAPVVELLNSRATSTYFSPKCPKWVPGHKQWINNNNQN* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2217 604 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 7 598 IPR004993 -
Amo13g2217 604 PANTHER BNAC03G14570D PROTEIN 7 598 - -
Amo13g2217 604 Pfam GH3 auxin-responsive promoter 21 566 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2217 Amo-Chr13 37436660 37439058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2217 9 584 EF-hand Containing Proteins AT1G23160 49.573 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2217 K14487 - gmx:100791987 1126.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2217 13 37436660 37439058 Amo13g2217 13 37436660 37439058 ECH