Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2211 ATGGCACCCTTCTTTAACAAACTCCTATTAACCCTCTCTCTCTTCTCTCTTATAATATCCCCTCAACGCTCTCTCTCATCCTCCATTCACGACCTTCTCCGTTCAAAAGGGTTGCCAGCTGGACTCCTACCGGAAGAAGTGAAGTCCTACAAGTTCTCCGACAATGGCCACTTGGAAGTGTTCCTCGACGCGCCATGCTTGACCAAGTACGAGAATAGGGTCTACTTCGAGAGCTTTGTAACCGCAAACCTCACCTATGGAAGCCTCATTGGTGTTGAGGGTCTTCAGCAAGAAGAGCTTTTTGTTTGGTTGCCTGTCAAGGACATTATAGTAAATGACCCTTCATCCGGTTTGATTCTATTTGATATTGGTCTTGCCCAGAAACAACTCTCCAGGTCTCTATTTGATATTCCACCTCGCTGCAAGAATGAAAATGGAGGTGGATTGAGGAATCATGTGAGGAAGGAGAAAGGATTCGAGGCCCTGAGATAG 492 0.4634 MAPFFNKLLLTLSLFSLIISPQRSLSSSIHDLLRSKGLPAGLLPEEVKSYKFSDNGHLEVFLDAPCLTKYENRVYFESFVTANLTYGSLIGVEGLQQEELFVWLPVKDIIVNDPSSGLILFDIGLAQKQLSRSLFDIPPRCKNENGGGLRNHVRKEKGFEALR* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2211 163 Pfam Protein of unknown function, DUF538 30 135 IPR007493 -
Amo13g2211 163 Gene3D - 16 144 IPR036758 -
Amo13g2211 163 PANTHER T31J12.3 PROTEIN-RELATED 11 162 IPR007493 -
Amo13g2211 163 PANTHER - 11 162 - -
Amo13g2211 163 SUPERFAMILY At5g01610-like 9 143 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2211 Amo-Chr13 37127505 37130103 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2211 - - gmx:100790931 243.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2211 13 37127505 37130103 Amo13g2211 13 37127505 37130103 ECH