Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2209 GTTATCCACTCAGCGAAGCTAACATCTCTCTATTTAAAACTGAAGTGGAACTCAGCGCACCACTTTCTCGTAAAATCCCTATTTGCTATTTTCTTCTGGTGTGATCTCACCATGGGTGGCGGAGGAGCTATGCGAACGGCGGCCAAAATTGCAGGAATCGGCTTCGGTCGGACTGCCTACAGGGGTTCTCCAGCGTCCCTTCCGACCGACCGGTCTGTGCGGAACGCGTCCGTGCCGGCATCTACCGCCAAGTTATCTCAGGAAGCCAAGTCTGCCGAGGTTGCGCCGCTGCACACGGCGGCGTCGTGGGAGTTAGACGATTGGGAGTTCGCCGATGAAGGCGAATTGGTTATGGTCGCCGGGGAACCCATGCCGCGGGTGGTGTTCCAGGGTGTCCCTACGTTTGAGGAAGCGAAGGAAGCCACCACCGAATTGAAGGAAGCTATTGATAAAGTATACCTTTCTCCTGATTCTTCCCATTCAGAGGGTTCCTCTCATGGTAGTGAAGTCTCTGTTCTGTCTCCTACTCAAGTTGAGACAGAGTGCAAAATTGTCGAGGCCATCTCAAGTCCATTGGTCCCTAAGCATGCCCTTCAGGCTTTTAAACTGCTTAGTACAAGCTCTCAGGCACAGACTGTGGTGGCTTCCATTGCTTGTGACCCAAATGTATGGGATGCGGTTATGCAAAATCCTGCTGTAACTGATTTCTTTAAGTTACACCAGGAAGTGGCTATTTCTGAAACAGAGGCAACTCCTGAAAACCTAGAAAATTGTGCCGCAGTTGCTGGTTCTGAGGCAAAGGAAACTGCAGAGAATGAGAAACTGTCGGCAGAGTCTGATTTGGGGAATGGTTCTTTCGATTTCATGAGCATTCTGGAGAATTTTAAGCTGACGGTGACTGAAATGGTAAGCAGTGTATCAAATTTCCTGCAGAACATTTTCCCAACAGCTGAGAAAGAGAAAACGCATGGCGATGCTGATGGAAATGATGAACAAAGTTTCATGGATACCAATAAAATCATGGGAGGAACTTTCATGGGATTGGCAGTGCTGGCTATAATGGTGGTATTGGTGAGGAGATCCTAA 1086 0.489 VIHSAKLTSLYLKLKWNSAHHFLVKSLFAIFFWCDLTMGGGGAMRTAAKIAGIGFGRTAYRGSPASLPTDRSVRNASVPASTAKLSQEAKSAEVAPLHTAASWELDDWEFADEGELVMVAGEPMPRVVFQGVPTFEEAKEATTELKEAIDKVYLSPDSSHSEGSSHGSEVSVLSPTQVETECKIVEAISSPLVPKHALQAFKLLSTSSQAQTVVASIACDPNVWDAVMQNPAVTDFFKLHQEVAISETEATPENLENCAAVAGSEAKETAENEKLSAESDLGNGSFDFMSILENFKLTVTEMVSSVSNFLQNIFPTAEKEKTHGDADGNDEQSFMDTNKIMGGTFMGLAVLAIMVVLVRRS* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2209 361 PANTHER OS08G0179900 PROTEIN 40 361 - -
Amo13g2209 361 PANTHER OS08G0179900 PROTEIN 40 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2209 Amo-Chr13 37035755 37039641 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2209 - - vra:106779153 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2209 13 37035755 37039641 Amo13g2209 13 37035755 37039641 ECH
Amo13g2209 13 37035755 37039641 Amo03g0296 03 5628451 5632849 hybridization