Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2182 ATGCAGGATGCCAATGTTAATCCTGATGTACAGACTTTCAGCTATTTGATTAGTAATTGTGAAACAGAAGAGGATATAATCAAGTATCGTGAAGAAATGGAGCAATATAAAATCCCACTTGCAAAACCGATTTTTATGGCCCTTATTAATTCATATGCAGCTTGTGGCAAATTGGATATGGCAAAACAGGTCATTTTGGATCCGAACATACCAGCAAAAAGCTTAAATGAAATCAAGAGCGTCCTTGTCTCAGCTCTTGCATCACATGGGCAGTTGTCCGAGGCACTCTTAGTATATGAGGAGATTAATAAAGCTGGATACAATTTGGAACCAAAAGCTGTTATAAGTCTTATCGAAGAGTTCACCAAATTCAAAGGAGAGTTGGATGGGATGCTTATGCTACTTACAGAATTGAGTGATCTAGACTATTGGGTCGATGGCTGCTTCAGAGTTATCATATATTGTATTCACAACAAGCATCTAAGTTCTGCTATTGACTTGTTCAAGAAACTCAAGGATAAGTTTGAAAGTGATGAACTAGTATTGGAAGTTCTCTTTGATGAAGTGTTTGCTGCAATTGCAACATCCGAGTCCTCAAATTTGCAGATTGGTTTAGACTTGCTTTGGGCAGTCAAGAACGAGCTTGGTCTCGTGCCTTCACGGCAATGTCTTGATTTTCTTCTAAGTGCCTGCACCAATGCTGGAGATTTGAGTAATGCTCGTTTGATTTGGAGAGAATATGAGGTTGCTGGATTTCCATACAATGTGCTAAGTTATTTGAGGATGTATCAAGCACTTTTGGCATCGGGAGATTATAGATCTGCTAACTTTATGCTAAGTAAAATTCCGAAAGATGACAGCGAGGTATCTGCTATCATCAAAGCCTGTCAAGAAACATACTCTGGTCTTTCCTCTGTGGCAAAGACGAAAACGAAAGTAACAAAAAAGAAAGAAAAACGAGAGGCTTGA 969 0.3891 MQDANVNPDVQTFSYLISNCETEEDIIKYREEMEQYKIPLAKPIFMALINSYAACGKLDMAKQVILDPNIPAKSLNEIKSVLVSALASHGQLSEALLVYEEINKAGYNLEPKAVISLIEEFTKFKGELDGMLMLLTELSDLDYWVDGCFRVIIYCIHNKHLSSAIDLFKKLKDKFESDELVLEVLFDEVFAAIATSESSNLQIGLDLLWAVKNELGLVPSRQCLDFLLSACTNAGDLSNARLIWREYEVAGFPYNVLSYLRMYQALLASGDYRSANFMLSKIPKDDSEVSAIIKACQETYSGLSSVAKTKTKVTKKKEKREA* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2182 322 Pfam PPR repeat 81 106 IPR002885 -
Amo13g2182 322 Pfam PPR repeat 45 65 IPR002885 -
Amo13g2182 322 Gene3D Tetratricopeptide repeat domain 149 322 IPR011990 GO:0005515
Amo13g2182 322 Gene3D Tetratricopeptide repeat domain 1 148 IPR011990 GO:0005515
Amo13g2182 322 PANTHER OS02G0132600 PROTEIN 1 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2182 Amo-Chr13 36402100 36406537 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2182 - - ahf:112737814 605.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2182 13 36402100 36406537 Amo13g2182 13 36402100 36406537 ECH
Amo13g2182 13 36402100 36406537 Amo03g0343 03 6332168 6333417 hybridization