Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2163 ATGGCAACAACTCGCATGATCCTCAGAGCAATTAAGAAACGCCCCTTTTTGTTCCCCGCATCATCCCACTCCTTCTCCTCTTCTCGACACGGAAGCACGCTGGTTGTGGCGGAGCACGATAGTGGCGCCGTGAAACCCCATTCTCTCTCTGCAGTTACGGCTGCCACGTCACTGGCTGGTCACGGTAACTCTTCCGTTTCGGTTCTGTTAGCTGGCTCAGGTCCTTCCCTTCATCAAGCTGCTTCACACGCTGCTTCTTCTCACCCTTCAGTCTCTCAGGTGCTCATAGCAGATTCAGAAAAATTCAAGAACCCTCTGGCAGAACCATGGGCAAAACTAGTCCATTTAGTCCAGCAGCAAGGGGGTTATTCTCATATAATTGCTGCTTCAAATTCTTTTGGCAAAAATATCATGCCCCGTGCAGCTGCCCTTTTAGACGTTTCTCCAATTACTGATGTTACTGGAATTTCCGATGCACAGACTTTTGTGAGGCCAATATATGCTGGAAATGCACTTTGTACTGTCCGCTATACGGGTTCCAATCCTTGTATACTGACGATTAGATCCACATCTTTTCCTATTCCCCAGAAATCAAATGACTCAAAAGCTGAGGCTTCAATATCCCAGGTCAACCTTTCGAACTTCGATGAAGATCTGAACAAGTCTAGATATATATATCAAACTTCTCAGGATGATGAAGGACCAGATCTTGGAAATGCACGGGTTGTAATTACCGGTGGCCGAGCACTYAAGAATGCTGAGAACTTTAAATTGATAGAAAATTTGGCCAAGAAACTTGGTGGTGCTGTTGGTGCCACACGTGCAGCTGTTGATGCAGGGTTTGTCCCAAATGACCTTCAGGTAGGGCAAACTGGGAAGATTGTTGCCCCTGAACTCTACATGGCTTTCGGTGTATCCGGAGCTATTCAACACTTAGCAGGAATGAGGGATTCTAAGGTTATTGTTGCCGTGAACAATGATGCTGATGCTCCTATATTTCAGGTTGCTGATTATGGACTTGTAGGAGACCTATTTGAGGTGATACCAGAGTTGCTAGAGAAGCTTCCTGAGAAAAAATAA 1080 0.4583 MATTRMILRAIKKRPFLFPASSHSFSSSRHGSTLVVAEHDSGAVKPHSLSAVTAATSLAGHGNSSVSVLLAGSGPSLHQAASHAASSHPSVSQVLIADSEKFKNPLAEPWAKLVHLVQQQGGYSHIIAASNSFGKNIMPRAAALLDVSPITDVTGISDAQTFVRPIYAGNALCTVRYTGSNPCILTIRSTSFPIPQKSNDSKAEASISQVNLSNFDEDLNKSRYIYQTSQDDEGPDLGNARVVITGGRALKNAENFKLIENLAKKLGGAVGATRAAVDAGFVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNNDADAPIFQVADYGLVGDLFEVIPELLEKLPEKK* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2163 359 Gene3D HUPs 32 229 IPR014729 -
Amo13g2163 359 SMART ETF_2 33 219 IPR014730 -
Amo13g2163 359 SUPERFAMILY DHS-like NAD/FAD-binding domain 235 355 IPR029035 -
Amo13g2163 359 Pfam Electron transfer flavoprotein FAD-binding domain 236 316 IPR014731 -
Amo13g2163 359 PANTHER ELECTRON TRANSFER FLAVOPROTEIN SUBUNIT ALPHA, MITOCHONDRIAL 24 357 - -
Amo13g2163 359 CDD ETF_alpha 33 203 IPR033947 -
Amo13g2163 359 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 32 205 - -
Amo13g2163 359 PANTHER ELECTRON TRANSFER FLAVOPROTEIN ALPHA 24 357 IPR001308 GO:0009055|GO:0050660
Amo13g2163 359 PIRSF Electra_flavoP_a 30 359 IPR001308 GO:0009055|GO:0050660
Amo13g2163 359 Gene3D - 230 359 - -
Amo13g2163 359 Pfam Electron transfer flavoprotein domain 33 205 IPR014730 -
Amo13g2163 359 ProSitePatterns Electron transfer flavoprotein alpha-subunit signature. 299 325 IPR018206 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2163 Amo-Chr13 35904351 35910203 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2163 K03522 - gmx:100793964 545.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2163 13 35904351 35910203 Amo13g2163 13 35904351 35910203 ECH