Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2042 ATGAATTTCCGCCAGCGTCAACCCCATGCGTCGCCGGTGGCCACCGCTACACCGGTCCGGGAGGAAGAGCCCTACAACATAATCCCCGTCTACAATCTCCTCGCTGACCACCCCTCCCTCCGGTTRCCMGAAGTCCGCGCCGCTGCAGCAGCACTACGCGCCGTTGGAGACCTCCGGCGGCCGCCGTTCGGGCAATGGCGACCTCACATGGACCTCCTTGACTGGCTCGCACTCTTCTTTGGCTTCCAGCGCGACAACGTCCGCAACCAGCGCGAGCACCTCGTCCTTCACCTCGCCAACGCTCAGATGCGCCTCACGCCGCCGCCGGACAACATCGACACACTCGATGCCGGCGTCCTCCGTCGCTTCCGCCGGAAGCTCCTCAAAAACTACAACTCTTGGTGCTCCTACCTAGGCAAGAAGTCCAACATCTGGATCTCCGACCGCCGCCGCGGCGGCTCCGCTGACTCTGAGCAGCGCCGTGAGCTCCTCTATGTGTCCCTCTACCTCCTGATCTGGGGCGAGGTGGCGAACCTCCGCTTTGTTCCGGAGTGCATCTGCTACATCTTCCACCACATGGCAATGGAGCTGAACAAGATCTTGGAGGATTACATTGACGAGAACACTGGCCAGCCTGTGATGCCTTCGCTTTCAGGTGAGAACGCTTTCCTCAACCACGTTGTGAAACCTATCTATGAAACTATTAGGCGTGAGGTTGATAGTAGTTGGAATGGAACTGCTCCGCACAGTGCTTGGAGGAATTACGACGATATCAATGAGTATTTTTGGAGTAGGAGGTGTTTTGAGAAGCTTGGATGGCCCCTTGATATTGGTAGCAACTTCTTTGTGACGGGTAGCGGTGGGAAGCGTGTTGGGAAGACTGGGTTTGTGGAGCAGAGGTCGTTTTTAAACCTGCTTAGGAGTTTTGATAGACTTTGGGTGATGCTGGTTTTGTTCCTTCAGGCTGCTATTATTGTTGCTTGGGAGGAGAAGACTTATCCGTGGCAAGCATTGGAGGACAGGAGTGTTCAGGTTAAGGTTTTGACCATTTTCTTCACGTGGAGTGGCATGAGGTTAGTGCAGTCTCTGCTTGATATGGTGATGCAGTTTAGGTTGGTGACAAGGGAGACGATGGGGCAAGGTGTGAGGATGGTGATGAAGGTTATTGTTGCAGCCGGGTGGATTGTTGTGTTTGGGGTCATGTATGAGAGGATATGGTCTCAGAGAAACCATGATAGGAGGTGGTCAGCAGAAGCGAATAGAAGGGTGGTGAATTTTCTGGAGGTTGTGTTTGTTTTCATCATTCCTGAGCTTCTGGCTCTGGCCCTTTTTATAATTCCCTGGATTAGAAACTTTGTTGAGAATACAAATTGGAGGATCTTTTACATGTTGTCATGGTGGTTTCAAAGTAGAATCTTTGTTGGTCGTGGCTTGAGGGAAGGTCTTGTGGACAACATTAAGTACACATTGTTCTGGGTTGTGGTGCTGGCCACAAAATTTTGTTTCAGTTACTTTCTGCAGGTCAAACCCATGGTTGCTCCAACAAAGGCACTGTTGAAGCTTAGGAATGTTGAATATGAATGGCATGAGTTTATTCATAACAGCAACCGATTTGCTGTTGGATTATTGTGGCTTCCGGTTGTTTTGATATATCTAATGGATATACAGATTTGGTATTCAATATATTCATCCTTTGTTGGGGCTGCTGTGGGGTTGTTTGCACATTTGGGTGAGATTCGAAATATGCAACAGCTGAAATTGAGGTTCCAGTTTTTTGCCAGTGCAATTCAGTTCAATCTCATGCCAGAGGAGCAATTGTTGAATGCAAGAGGAACATTGAAGAGCAAGTTTAAGGATGCCYTCCACAGGTTGAAGCTCAGATATGGGCTTGGTCGGCCATTTAAGAAGCTTGAGTCTAACCAGGTTGAGGCCAACAAGTTTGCTTTGATATGGAATGAGATAATTTTGTCTTTCAGGGAGGAGGATATCATCTCTGACAGGGAGGTTGAGCTTTTGGAGCTGCCACAGAACTCTTGGAATGTCAGGGTTATCCGCTGGCCATGTTTTCTTCTCTGCAATGAGTTGCTGCTTGCACTCAGTGAAGCCAAAGAACTGGTTGATGAGTCTGACAACAAGCTGACAAGAAAGATYCGCAAGAATGAGTACAGACGCTGTGCTGTCATTGAAGCATATGATAGCATAAAGCACTTGCTTCTTGAGATTATCAAACCCAACAGTGAAGAGCATTCTATTGTGACAGTTCTATTRCAAGAAATTGATCACTCTRTGGAGATTGAGAAATTCACAAAAACATTCAAAACCACTGCACTGCCTCTGCTCCATAGCAAGTTGATAAAGCTTGTTGATTTATTAAACAAACCCAAGAAAGATGCTACTCAAGTGGTGAATAGCCTTCAGGCCCTTTATGAGATTGCTGTCCGAGATTTTTTCAGGGAAGAAAGGAAAACCGAACAGCTGAGGGAGGATGGTTTGGCTCAACGTAACCCAGGTTCAGGTCTCCTTTTTGAGAATGCTATTCAGTTACCTGAGATCAACAATGAGAACTTCTATCGGCAGGTTCGGCGTTTGCACACAATTCTCACCTCCAGGGATTCYATGCAAAACATCCCCAAAAATCTAGAAGCTAGACGGAGGATTGCCTTTTTCAGTAATTCACTTTTTATGAACATGCCCCATGCTCCCCAAGTTGAGAAAATGTTGGCTTTCAGTGTTTTAACACCTTATTACTCGGAAGAAGTATTATACAGCAAAGAACAGCTCAGAACTGAGAATGAAGATGGGGTTTCAATCCTTTATTATTTGCAGACTATATATGATGATGACTGGAAGAATTTTATGGAAAGGATGCGTCGGGAGGGGATGGTGAAAGACAGTGATATTTGGGCTGATAAGCTTAGAGAGTTGAGGCTTTGGGCTTCCTACAGAGGCCAGACACTAACACGYACAGTTAGAGGAATGATGTATTACTACCGGGCCCTCAAGATGCTGGCTTTCCTGGACTCTGCGTCAGAAATGGATATTCGAGAGGGATCCCGTGAACTTGTTACAATGAGGCAAGATAGTTTAGATGTTATGAACGCRGAAAAGTCACCATCTAGGAGTTTAAGCAGYGCAAGTAGTTCAGTAAGTTTGTTATTCAAAGGCCATGAATATGGGACTGCTTTAATGAAATTCACATATGTGGTTGCCTGCCAGATATATGGATCTCAGAAAGCAAAAAAGGATCCTCATGCTGAGGAAATTTTGTATCTGATGAAAAACAACGAAGCTCTTCGGGTTGCCTATGTTGATGAAATAACCACTAGTAGGGATGAGAAGGAGTACTACTCCGTTCTTGTTAAGTATGACCAACAATTGCAGAGAGAGGTGGAAATTTACCGTGTAAAGTTGCCTGGTCCCTTGAAGCTTGGGGAAGGAAAGCCAGAAAATCAAAATCATGCCATCATATTCACTCGTGGTGATGCAGTTCAAACTATTGATATGAACCAGGATAACTACTTTGAGGAGGCACTGAAAATGCGAAATCTCTTGGAAGAATACAGGCATTACTATGGCATCCGGAAACCAACTATTTTGGGAGTTAGGGAGCATGTTTTTACTGGTTCTGTTTCCTCTCTTGCTTGGTTCATGTCAGCTCAGGAAACAAGTTTTGTCACCTTAGGACAGAGGGTTTTGGCAAATCCTTTGAAGGTTAGGATGCATTATGGTCATCCAGATGTATTTGACAGGTTTTGGTTCTTAACACGTGGTGGTATCAGCAAAGCTTCCAGAGTGATCAACATCAGTGAAGACATTTTTGCTGGCTTTAATTGTACTCTCCGAGGAGGTAATGTTACACACCATGAATACATTCAGGTTGGAAAGGGAAGGGACGTTGGATTGAATCAAGTATCAATGTTTGAAGCAAAGGTTGCTAGTGGGAATGGGGAGCAAGTCCTTAGCAGAGACGTGTATAGATTGGGTCATAGGCTGGACTTTTTCCGCATGCTCTCTTTCTTCTACACTACTGTGGGATTCTTCTTCAACACAATGATGGTGATTCTGACTGTATATGCCTTTCTATGGGGTCGACTTTATCTTGCCCTTAGTGGTGTTGAGGCTGCAATGGAAAGTAACAGCAATAACAATAAAGCACTTGGTACCATCTTGAATCAGCAGTTCATTATTCAACTTGGACTTTTCACTGCCCTTCCAATGATTGTAGAGAATTCCCTTGAGCATGGGTTCCTTCAGGCTATCTGGGATTTCTTGACAATGCAGCTCCAGCTTTCATCAGTTTTTTACACATTCTCAATGGGCACTCGTAGTCATTTCTTTGGCCGGACTATTTTGCATGGTGGGGCAAAATATCGGGCTACCGGACGTGGATTTGTTGTAGAGCACAAGAGTTTTGCTGAGAACTATAGACTCTATGCACGWAGCCATTTTGTGAAAGCAATTGAATTGGGGTTAATTCTTGTAATCTATGCTTCACACAGTCCTGTGGCATCTGACACATTTGTGTATATAGCCATGACCATTACTAGTTGGTTCTTAGTGGCATCGTGGATTATTGCACCGTTTGTTTTCAATCCTTCTGGCTTTGACTGGTTAAAAACTGTGTATGATTTCGATGACTTTATGAACTGGATTTGGTACAGAGGAAGTGTGTTTGCTAAGGCTGAACAGAGCTGGGAAAGGTGGTGGTATGAAGAGCAGGATCATCTAAGAGTAACTGGCCTTTGGGGGAAATGTATGGAGATAATTTTAGACCTTCGTTTCTTCTTTTTCCAGTATGGAATTGTATATCAGCTAGGAYTTGCTGCTGGAAGTCACAGTATTGTTGTTTACRTGCTGTCTTGGATTTGTGTGGTTCTTATATTTGGGGTATATATGCTGGTTGCATATGCCCACAACAAATATGCAGCCAAAGAGCATATATACTATCGGCTGGTCCAGTTCCTCCTCATAATTCTCGCAATTCTTGTGATAGTTGCTTTYCTGGAATTCACCAACTTCAAATTTGTGGARATCTTTACTAGCCTGTTGGCATTCATTCCCACGGGCTGGGGCCTGATACTGATTGCCCAAGTATTTCGGCCATTTTTGGAATCAACTATAGTTTGGGATGGAGTTGTTTCAGTGGCTCGTCTATATGACATATTGTTAGGAGTCATTATTATGGCCCCTGTGGCACTACTATCATGGTTGCCTGGGTTTCAGAACATGCAAACCAGAATGCTTTTCAATGATGCATTTAGCAGGGGCCTCCGGATATTCCAAATTATTACAGGGAAAAAGTCTCAAGCTTGA 5313 0.4476 MNFRQRQPHASPVATATPVREEEPYNIIPVYNLLADHPSLRLPEVRAAAAALRAVGDLRRPPFGQWRPHMDLLDWLALFFGFQRDNVRNQREHLVLHLANAQMRLTPPPDNIDTLDAGVLRRFRRKLLKNYNSWCSYLGKKSNIWISDRRRGGSADSEQRRELLYVSLYLLIWGEVANLRFVPECICYIFHHMAMELNKILEDYIDENTGQPVMPSLSGENAFLNHVVKPIYETIRREVDSSWNGTAPHSAWRNYDDINEYFWSRRCFEKLGWPLDIGSNFFVTGSGGKRVGKTGFVEQRSFLNLLRSFDRLWVMLVLFLQAAIIVAWEEKTYPWQALEDRSVQVKVLTIFFTWSGMRLVQSLLDMVMQFRLVTRETMGQGVRMVMKVIVAAGWIVVFGVMYERIWSQRNHDRRWSAEANRRVVNFLEVVFVFIIPELLALALFIIPWIRNFVENTNWRIFYMLSWWFQSRIFVGRGLREGLVDNIKYTLFWVVVLATKFCFSYFLQVKPMVAPTKALLKLRNVEYEWHEFIHNSNRFAVGLLWLPVVLIYLMDIQIWYSIYSSFVGAAVGLFAHLGEIRNMQQLKLRFQFFASAIQFNLMPEEQLLNARGTLKSKFKDAXHRLKLRYGLGRPFKKLESNQVEANKFALIWNEIILSFREEDIISDREVELLELPQNSWNVRVIRWPCFLLCNELLLALSEAKELVDESDNKLTRKIRKNEYRRCAVIEAYDSIKHLLLEIIKPNSEEHSIVTVLLQEIDHSXEIEKFTKTFKTTALPLLHSKLIKLVDLLNKPKKDATQVVNSLQALYEIAVRDFFREERKTEQLREDGLAQRNPGSGLLFENAIQLPEINNENFYRQVRRLHTILTSRDSMQNIPKNLEARRRIAFFSNSLFMNMPHAPQVEKMLAFSVLTPYYSEEVLYSKEQLRTENEDGVSILYYLQTIYDDDWKNFMERMRREGMVKDSDIWADKLRELRLWASYRGQTLTRTVRGMMYYYRALKMLAFLDSASEMDIREGSRELVTMRQDSLDVMNAEKSPSRSLSSASSSVSLLFKGHEYGTALMKFTYVVACQIYGSQKAKKDPHAEEILYLMKNNEALRVAYVDEITTSRDEKEYYSVLVKYDQQLQREVEIYRVKLPGPLKLGEGKPENQNHAIIFTRGDAVQTIDMNQDNYFEEALKMRNLLEEYRHYYGIRKPTILGVREHVFTGSVSSLAWFMSAQETSFVTLGQRVLANPLKVRMHYGHPDVFDRFWFLTRGGISKASRVINISEDIFAGFNCTLRGGNVTHHEYIQVGKGRDVGLNQVSMFEAKVASGNGEQVLSRDVYRLGHRLDFFRMLSFFYTTVGFFFNTMMVILTVYAFLWGRLYLALSGVEAAMESNSNNNKALGTILNQQFIIQLGLFTALPMIVENSLEHGFLQAIWDFLTMQLQLSSVFYTFSMGTRSHFFGRTILHGGAKYRATGRGFVVEHKSFAENYRLYARSHFVKAIELGLILVIYASHSPVASDTFVYIAMTITSWFLVASWIIAPFVFNPSGFDWLKTVYDFDDFMNWIWYRGSVFAKAEQSWERWWYEEQDHLRVTGLWGKCMEIILDLRFFFFQYGIVYQLGXAAGSHSIVVYXLSWICVVLIFGVYMLVAYAHNKYAAKEHIYYRLVQFLLIILAILVIVAFLEFTNFKFVEIFTSLLAFIPTGWGLILIAQVFRPFLESTIVWDGVVSVARLYDILLGVIIMAPVALLSWLPGFQNMQTRMLFNDAFSRGLRIFQIITGKKSQA* 1771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2042 1770 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 162 274 IPR026899 -
Amo13g2042 1770 Pfam 1,3-beta-glucan synthase component 876 1665 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Amo13g2042 1770 SMART FKS1_dom1_2 160 276 IPR026899 -
Amo13g2042 1770 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 3 1770 - -
Amo13g2042 1770 PANTHER GLYCOSYL TRANSFERASE, FAMILY 48, 1,3-BETA-GLUCAN SYNTHASE SUBUNIT FKS1-LIKE, DOMAIN-1-RELATED 3 1770 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2042 Amo-Chr13 31652481 31660845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2042 1 1770 Glycosyltransferase AT4G03550 75.769 0.0 2764
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2042 K11000 - gmx:100811121 3129.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2042 13 31652481 31660845 Amo13g2042 13 31652481 31660845 ECH