Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2000 ATGCAGGTTGATGAAGATGAGATTTATTGGAGACATAGAAAGAAAGATGAAGAGTTGGAATGGTCACATAATTCCACTCACTTAGTATCTCAGTTTGCTCAATGTTTTTCTAATGCTATGGTTGGATCAAGATCATGGATAGGAGCACTCTTTAGCCGCAGTAACACTCGAAGAAATGCTGACTATCTTTTGACACAAATCCAGGAGCAAAGACTTCAAAGACTTCAAGAACGGATGAATGTTCCATTCGATGAGGCTCGACCGGATCATCAAGAAGCATTGTGTTCATTGTGGCATTGTGCCTTTCCAAATGTCTCTCTGAAAGGCTTGATATCTGATCAATGGAAAGAAATGGGATGGCAAGGTCCTAATCCATCAACAGACTTTAGGGGGTGCGGCTTCATTTCGCTCGAAAACCTACTCTATTTCGTGAGGACTTATCCGACATCTTTTAACAGGTTGATGACAAAGAAAGGAGGAAAGCGAGCGACATGGGAGTATCCGTTTGCCGTTGCTGGCATTAACATATCATATATGTTGATACAGATGCTGGATTTACACTCAGAGAAGCCTAGATGTCTTCCGGGCATTAATTTTGTCAGGTTATTAGGAGAAGATGAAGAAGCATTCGATGTTCTATTTTGTGTAGCGTTCGAGATGATGGATGCGCAGTGGCTTGCTATGTGTGCAGAGTACATGGACTTCAATGAGGTTCTACGAGCGACGCGGCTGCAATTGGAGAGAGAGCTATCCTTAGAAGACATCCATAGAATACAAGACTTACCTGCTTACAACCTCTTGTATCAATAG 810 0.4222 MQVDEDEIYWRHRKKDEELEWSHNSTHLVSQFAQCFSNAMVGSRSWIGALFSRSNTRRNADYLLTQIQEQRLQRLQERMNVPFDEARPDHQEALCSLWHCAFPNVSLKGLISDQWKEMGWQGPNPSTDFRGCGFISLENLLYFVRTYPTSFNRLMTKKGGKRATWEYPFAVAGINISYMLIQMLDLHSEKPRCLPGINFVRLLGEDEEAFDVLFCVAFEMMDAQWLAMCAEYMDFNEVLRATRLQLERELSLEDIHRIQDLPAYNLLYQ* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2000 269 ProSiteProfiles ELMO domain profile. 89 250 IPR006816 -
Amo13g2000 269 PANTHER ENGULFMENT AND CELL MOTILITY 37 268 - -
Amo13g2000 269 Pfam ELMO/CED-12 family 74 239 IPR006816 -
Amo13g2000 269 PANTHER BNAC05G01970D PROTEIN 37 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2000 Amo-Chr13 30449065 30453399 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2000 K23538 - gmx:100800270 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2000 13 30449065 30453399 Amo13g2000 13 30449065 30453399 ECH
Amo13g2000 13 30449065 30453399 Amo03g0614 03 11333374 11336715 hybridization