Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1964 ATGTCTTCAAAAGACTCAAACTTGTTGAACAACTTTAATATTCCGGATTACATTCTCGTGCCGGAATCCAAAACTCAAAGCATTGAAGTCGGTAACGATCATGATTCGGTGCCAAAGTCTCCGGTTCTTGTTTTTATTAACTCCAGGAGCGGTGGACAACTCGGAGGGGAACTCTTGAAAACATACAGAACTCTTCTTAATGAGAAACAGGTTTTTGATTTGGGGGAAAATGCTCCTGATAAGGTGCTGCATTCAATCTATGCTAAGTTGGAAAATCTCAAGGTCCAGGGTGACCAATTTGCCATGAAGATTATGGAGAGGCTGAAGTTAATTGTTGCAGGAGGTGATGGAACAGCAGGGTGGTTACTTGGAGTTGTTTGTGATCTCAAYTTATCTCATCCACCACCAATAGCCACAGTTCCCTTGGGCACAGGGAATAATCTTCCTTTTGCATTTGGTTGGGGGAAGAAGAACCCRGGGACGGATCAAAACTCAGTTGAGCAATTTTTAGATCAAGTCATGAAGGCTAAGGAAATGACAATAGACAACTGGCATATCGTCATGAGAATGAGAGCTCCTAAAGAAGGTTCCTGTGATCCAATTCCGCCGCTCGAGTTACCGCATTCTTTGCATGCATTCCAGCGTGTATCTGCGGGAGATGAACTTAATGTGGAAGGTTACCACACTTTCCGTGGAGGGTTTTGGAATTACTTTAGCATGGGCATGGATGCTCAAGTGTCCTATGCATTTCATTCTGAACGAAAGATGAATCCTGAAAAATTCAAGAACCAGTTGGTTAATCAGAGTACTTATGCTAAGCTTGGATGCTCACAAGGATGGTTTTTTGCTTCCTTATTCCATCCTGCTGACAGGAACATAGCGCAACTTGCGAAAGTAAAAATTATCCGAAGGCGTGGTAAATGGGAAGACCTACCTATACCTCCCTACATCAGGTCAATTGTGTGTCTTAACTTGCCCAGTTTTTCTGGTGGATTGAATCCATGGGGTACACCGAATCAGAAAAAGCTTGAACAGAGAGATTTGACACCACCATTTGTGGATGATGGCCTTTTAGAGGTTGTTGGTTTTAGAGATGCATGGCATGGCCTTGTTTTGCTTGCTCCAAAAGGACATGGAACTCGTCTTGCTCAGGCGCATAGAATCAGGTTTGAGTTCCACAAAGGCACAGCAGATCACACATTCATGAGGATCGACGGGGAGCCGTGGAAGCAACCTCTCCCAGTTGATGATGACACCGTTGTGGTGGAGATTTCTCACCATGGCCAGGTTAACATGCTTGCCACTGAAACGTGCAAGTCTAAGAGTGTGAATGATCCTTTATCACCGCGCCACACTGATGATGCGGAGGAAGATGACAGCGACGAGGATGAACACTCTACAGGAGAGGAGTTTCGGAAGTTTGGTGCAGCAGACACTTTTAGAATTCCAGATGATGTTGATATTTCTCACCTTAGTTAG 1479 0.4435 MSSKDSNLLNNFNIPDYILVPESKTQSIEVGNDHDSVPKSPVLVFINSRSGGQLGGELLKTYRTLLNEKQVFDLGENAPDKVLHSIYAKLENLKVQGDQFAMKIMERLKLIVAGGDGTAGWLLGVVCDLNLSHPPPIATVPLGTGNNLPFAFGWGKKNPGTDQNSVEQFLDQVMKAKEMTIDNWHIVMRMRAPKEGSCDPIPPLELPHSLHAFQRVSAGDELNVEGYHTFRGGFWNYFSMGMDAQVSYAFHSERKMNPEKFKNQLVNQSTYAKLGCSQGWFFASLFHPADRNIAQLAKVKIIRRRGKWEDLPIPPYIRSIVCLNLPSFSGGLNPWGTPNQKKLEQRDLTPPFVDDGLLEVVGFRDAWHGLVLLAPKGHGTRLAQAHRIRFEFHKGTADHTFMRIDGEPWKQPLPVDDDTVVVEISHHGQVNMLATETCKSKSVNDPLSPRHTDDAEEDDSDEDEHSTGEEFRKFGAADTFRIPDDVDISHLS* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1964 492 PANTHER DIACYLGLYCEROL KINASE 2 492 - -
Amo13g1964 492 PIRSF DAG_kinase_plant 1 439 IPR016961 GO:0004143
Amo13g1964 492 ProSiteProfiles DAG-kinase catalytic (DAGKc) domain profile. 37 190 IPR001206 GO:0016301
Amo13g1964 492 PANTHER DIACYLGLYCEROL KINASE 2 492 IPR037607 GO:0004143|GO:0007165
Amo13g1964 492 MobiDBLite consensus disorder prediction 436 478 - -
Amo13g1964 492 Gene3D - 233 416 - -
Amo13g1964 492 SMART dagk_c4a_7 41 184 IPR001206 GO:0016301
Amo13g1964 492 Pfam Diacylglycerol kinase accessory domain 234 408 IPR000756 GO:0004143|GO:0007205
Amo13g1964 492 Pfam Diacylglycerol kinase catalytic domain 41 166 IPR001206 GO:0016301
Amo13g1964 492 Gene3D - 39 188 IPR017438 -
Amo13g1964 492 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 41 410 IPR016064 -
Amo13g1964 492 SMART dagk_c4b_2 236 408 IPR000756 GO:0004143|GO:0007205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1964 Amo-Chr13 29725663 29730613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1964 6 485 Acyl Lipid Metabolism Gene Families AT2G20900 74.896 0.0 740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1964 K00901 - gmx:100817198 806.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1964 13 29725663 29730613 Amo13g1964 13 29725663 29730613 ECH
Amo13g1964 13 29725663 29730613 Amo03g0662 03 12197879 12202790 hybridization
Amo08g1110 08 18642445 18646643 Amo13g1964 13 29725663 29730613 PCT
Amo13g1964 13 29725663 29730613 Amo08g1110 08 18642445 18646643 PCT