Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1953 ATGAGGAACTTCTCAAAGTTGAACAAGATGTTCCTCTGTTTTCGCCCCGTCTTGGACATCGATGACGCCATCAAGCCGGAAAACAAAACATTGTTATTTCCGAAAGGGTCCTCCAAGTTCTCTCAGGGATTGAGGATCATGCAACAACCTCCCAAGAAAACCATTATTCGAGTCTTCCAAACCATATTGAATCGAAGAGCATGCCAGAAGAAGAACCGTTACAATCGCATCAATGATTCTTTTGGCGCTTTAGAAACGAAATCTCTTCTCAAATCAACTTTGTCGACTCGTCCTTCAACTCCAAAGGCAACCTTAGAATCAAAGAATTTACAAACAAAACAAGAACAAAAAAGAACAAAGCAAACCAAGTTTGAATCGTATGGAATATACTTGATTCTGATGAGTCTGTTATTCACCGTAATTTGGGGCAAGCTTGTTGGCATTATTCTAACATCAATGTGGCTATACCTTATCATCACACTTTGCAACTCACCAAGCTACTATTGCTCCCAAAAGAGGCTCCAAAGATGTTCATATCCAACAGGGATAGATCATAGGGGCAATTACGGAAAGTGCTACTCCAAGCATCATAATTAA 597 0.4003 MRNFSKLNKMFLCFRPVLDIDDAIKPENKTLLFPKGSSKFSQGLRIMQQPPKKTIIRVFQTILNRRACQKKNRYNRINDSFGALETKSLLKSTLSTRPSTPKATLESKNLQTKQEQKRTKQTKFESYGIYLILMSLLFTVIWGKLVGIILTSMWLYLIITLCNSPSYYCSQKRLQRCSYPTGIDHRGNYGKCYSKHHN* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1953 198 MobiDBLite consensus disorder prediction 93 110 - -
Amo13g1953 198 PANTHER OS07G0553800 PROTEIN 95 158 - -
Amo13g1953 198 PANTHER OS07G0553800 PROTEIN 1 85 - -
Amo13g1953 198 MobiDBLite consensus disorder prediction 93 117 - -
Amo13g1953 198 PANTHER OS07G0553800 PROTEIN 95 158 IPR040411 -
Amo13g1953 198 PANTHER OS07G0553800 PROTEIN 1 85 IPR040411 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1953 Amo-Chr13 29374183 29375381 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1953 - - adu:107477867 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1953 13 29374183 29375381 Amo03g0694 03 12838025 12839153 hybridization
Amo18g0924 18 13869381 13870596 Amo13g1953 13 29374183 29375381 PCT
Amo13g1953 13 29374183 29375381 Amo18g0924 18 13869381 13870596 PCT