Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1918 ATGCCACAGGCTCCCATTCAGTACAACAACATCCAAAATGACGAATTTATCCATGATGATAATTATGGTAACAATAACAAGAAAGCACTGAAATACATTGAGGATGTTACGAGCAAAGCTGATGAAATCCAAGAAAGGGTAATTGAGGAGATCCTTAAATCAAGCGCTCATGTTGAGTACCTTGAAAGGCATGGCCTAAATGGTCGCACAGACAGGGACACATTCAAGGAGGTGATTCCTGTCGTCAATTATGAGGATTTGAAGCCAGAAATTGATCGTATTGCTAATGGTGATTCCTCACCTATTTTGTGTTCCAAACCCATATCAGAGTTCCTCACTAGCTCCGGCACATCCGGTGGGGAGAGAAAGCTGATGCCAACAATAGAAGAGGAGCTAGGGAGAAGGACATTACTTTACAGCCTATTGATGCCGGTAATGGACCAATTTGTACCAAACTTACACAAAGGCAAAGGCATGTACTTCTTGTTCATCAAATCAGAGACAAAAACCCCAGGTGGACTCATAGCACGCCCAGTTCTAACAAGCTATTACAAAAGCTCACATTTCAACAACAATAACTCTTCTCATAACAACCCTCACAAAAACTACACTAGCCCTAATGAGACCATCCTCTGCCTAGACTCTTTCCAGAGCATGTACTCCCAATTGCTCTGTGGCCTTCTCCAGAGCCACCAAGTCCTCCGAGTTGGCGCCGTCTTCGCCTCCGGATTCATCCGCGCTATTAAGTTTCTCGAGAAATTTTGGGCCGATTTGTGTCGCGACATTCGGACCGGCACAATTGACCCCAAAATTAGTGACACTAGTGTTAGGGAGGCTGTGATGAGAATTATGAAGAGGCCAAATCCAAAGCTTGCTTCTTGTATTGAAGGTGAATGCATGAAGGGGTCGTGGAAAGGGATAATTACTAGGTTGTGGCCTAATACAAAATATGTTGATGTTATTGTGACAGGGACCATGGCTCAGTATATTCCTATATTGGATTATTATAGTAATGGTTTGCCTCTTGTTTGTACCATGTATGCTTCTTCTGAGTGTTACTTTGGGATCAATTTGAATCCTTTGTGTGACCCAGGGAAGGTTTCATATACACTAATTCCCACCATGGCCTACTTTGAGTTCTTGCCTCTCAACAAGATGAATGGTGGTAATGGACATAGCAATAATTCAAATAATCAATTGGTAAAGGAAGATCTTGTTGACCTTGTAGATGTAGAGTTGGGTCAAGAATATGAGCTTGTGGTAACCACCTATGCAGGGCTCTATAGGTACCGAGTTGGTGACATACTCCGTGTAGCAGGATTCAAGAACAAGGCTCCTCAATTCAACTTCGTCTGTAGAAAGAACGTCGTCCTGAGCATAGATTCCGACAAAACCGACGAAGTCGAGCTACAAAATGCCGTCAAGAGCGGCGCAAACCACCTCAAACAATTCGGTGCAACGGTCACAGAATACACAAGCTGCGTGGACACTTCCACCATCCCAGGACACTACGTCTTGTTCTGGGAGATCAACACGCATACTAAACAAACCCTAAACACAGACAAAAATATTTCTTCGTCTGTGTTTAAGGAATGTTGTCACGCTGTTGAGGAATCCCTCAACAGCGTGTATCGCCAGGGAAGGGCGTCGGAGTCTATTGGGCCGTTGGAAATCAAGATTGTGGAGAATGGTACTTTTGATAAGCTTATGGATTTTGCTTTGAGCCAAGGTGCATCAATAAATCAGTACAAGACACCAAGGTGTGTGAAATATGCTCCCATTGTGGAACTGTTGAACTCAAAAGTGGTGTGTAGCTACTTCAGTGAAAAATGTCCTAAGTGGGTTCCTGGTCACAAGAGATGGTGCAATAACAATTTTGAATGA 1884 0.4347 MPQAPIQYNNIQNDEFIHDDNYGNNNKKALKYIEDVTSKADEIQERVIEEILKSSAHVEYLERHGLNGRTDRDTFKEVIPVVNYEDLKPEIDRIANGDSSPILCSKPISEFLTSSGTSGGERKLMPTIEEELGRRTLLYSLLMPVMDQFVPNLHKGKGMYFLFIKSETKTPGGLIARPVLTSYYKSSHFNNNNSSHNNPHKNYTSPNETILCLDSFQSMYSQLLCGLLQSHQVLRVGAVFASGFIRAIKFLEKFWADLCRDIRTGTIDPKISDTSVREAVMRIMKRPNPKLASCIEGECMKGSWKGIITRLWPNTKYVDVIVTGTMAQYIPILDYYSNGLPLVCTMYASSECYFGINLNPLCDPGKVSYTLIPTMAYFEFLPLNKMNGGNGHSNNSNNQLVKEDLVDLVDVELGQEYELVVTTYAGLYRYRVGDILRVAGFKNKAPQFNFVCRKNVVLSIDSDKTDEVELQNAVKSGANHLKQFGATVTEYTSCVDTSTIPGHYVLFWEINTHTKQTLNTDKNISSSVFKECCHAVEESLNSVYRQGRASESIGPLEIKIVENGTFDKLMDFALSQGASINQYKTPRCVKYAPIVELLNSKVVCSYFSEKCPKWVPGHKRWCNNNFE* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1918 627 Pfam GH3 auxin-responsive promoter 33 590 IPR004993 -
Amo13g1918 627 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 20 621 - -
Amo13g1918 627 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 20 621 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1918 Amo-Chr13 28830109 28836667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1918 30 608 EF-hand Containing Proteins AT1G23160 48.625 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1918 K14487 - gmx:100819676 977.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1918 13 28830109 28836667 Amo13g1918 13 28830109 28836667 ECH