Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1878 ATGACTCACCCGCTCACTCGCTCTCAACTCGCCCGAGTCACCACACTCACTCACTTCCTTCGCCCCAAACTAAAACCCCACAATCTCCCCATAACAACAACAGTTTCTCTTTCTAGAACCTTCTCCTTCGCACAATTCTCCACCGCTGCTACCCGCCCTATCCACACCTTCCTCCGGCCAGCGATGGACGACGCGCAAACGCCGCCGTCCGCCGCACCGGTGGGCGACGACTTCGTCCACATCGAGGATCTGAAGATGGAGAGTCTCTCTGACAGCATGGTTCGCATCGATGAGGCTTCCGGCGCTGGTGCTTCTGCCGCCGTTGGAGATTTGTCGGTTCCTGAGGCTCCGGCGGAAAGTTCCGATCGACGTCATCCGGAGCTCCCGGAGGAACTTTCCAGGAACGTGATGGTGCTGTCGTGCGAGTCCTCTGCCGAAGGCGGTGTGTGTGACGTCTACCTCGTCGGCACCGCGCATGTCTCCGAGGAATCAAGCAGAGAAGTTCAGGCAATTGTCAGTCTTCTGCYGCCAGAGGTTGTCTTCTTAGAATTGTGCTCAAGTCGTGTGGCAGTGCTTACCCTGCAAAATCTTAAGGTACCCACGATGGCAGAGATGGTTGCATTGATAAAGAAAAAACATAATATGTTTGAAGTACTTTATGGCTGGTTCCTTGCCAAGATTGCTAGCAAGCTCGAAGTCTTTCCTGGCTCTGAGTTTCGTGTAGCATATGAAGAAGCAATGAAGTATGGTGGCAGGGTGATCCTAGGCGACCGCCCAGTACAGATTACAGTAAGGAGAACATGGAGTAAGATGCCACTTTGGCATAAGACAAAGTTTTTGTACTCTCTACTTTTCCAAGCAGTTTTTTTACCCAGCTCAGATGATCTCAATAAAATGTTGAAGCAAATGAATGATAGTGATGTGCTAACTTTAGTTATTCAAGAAATGAGTAAGCAATTTCCAACTTTGATGGAGACTCTTGTGCATGAACGAGATCAATACATGTCCTCGACATTATTAAAAGTGGCTAGCGAGAATAGGTCAGTGGTTGCTGTTGTTGGGAAGGGGCATCTCCAAGGAATAAAGAAGCACTGGAAGCAACCTGTAATGATGAGGGATCTGATGACAGTTCCATCCCCAAAACCAGCTATGTCTGCAATCAAAATCCTCACATCTGTGGGTGTTGCCGTGGCTGGGGTGGCCATCATATCGGGCATATATCTTTCATCCAAGAAATGA 1239 0.4931 MTHPLTRSQLARVTTLTHFLRPKLKPHNLPITTTVSLSRTFSFAQFSTAATRPIHTFLRPAMDDAQTPPSAAPVGDDFVHIEDLKMESLSDSMVRIDEASGAGASAAVGDLSVPEAPAESSDRRHPELPEELSRNVMVLSCESSAEGGVCDVYLVGTAHVSEESSREVQAIVSLLXPEVVFLELCSSRVAVLTLQNLKVPTMAEMVALIKKKHNMFEVLYGWFLAKIASKLEVFPGSEFRVAYEEAMKYGGRVILGDRPVQITVRRTWSKMPLWHKTKFLYSLLFQAVFLPSSDDLNKMLKQMNDSDVLTLVIQEMSKQFPTLMETLVHERDQYMSSTLLKVASENRSVVAVVGKGHLQGIKKHWKQPVMMRDLMTVPSPKPAMSAIKILTSVGVAVAGVAIISGIYLSSKK* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1878 412 PANTHER PHEROMONE SHUTDOWN PROTEIN 58 412 IPR046345 -
Amo13g1878 412 Pfam TraB/PrgY/gumN family 147 367 IPR002816 -
Amo13g1878 412 PANTHER TRAB FAMILY PROTEIN 58 412 - -
Amo13g1878 412 MobiDBLite consensus disorder prediction 107 128 - -
Amo13g1878 412 CDD TraB_PrgY-like 152 365 IPR046345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1878 Amo-Chr13 27837462 27842873 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1878 - - adu:107477804 772.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1878 13 27837462 27842873 Amo13g1878 13 27837462 27842873 ECH