Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1812 ATGGCAGAACCCAAAGTTAAGTATGATCGCCAACTCAGGATATGGGGTGAACAAGGACAGGCAGCACTTGAGAAATCTAGTATTTGCTTACTTAACTGTGGCCCTACTGGCTCTGAAACACTTAAGAATCTTGTTCTTGGTGGGATAGGAAGCATCACTGTAGTTGATGGATCTAAAGTTGAAGTGGGTGATCTTGGAAACAATTTTCTGGTGGATGAGTCAAGTGTCGGGCAGTCAAAGGCAAAATGTGTTAGCTCATTTCTTCAAGAGCTAAACGATTCTGTTAAAGCAAAATTTGTAGAGGAGTATCCAGAGGCATTGATTGAGACAAACCCATCATTCTTTTCTCAGTTTACTTTGGTCATTGCCACACAGCTTGTCGAAAGTTCAATGATAAAGCTTGATCGAATCTGCCGGGAGGCAAACGTTATTTTGATCTTTGCTCGTTCCTATGGCCTTACAGGGTTTGTTCGAATTAGTTTGAAGGAGCATACTGTCATCGAGTCAAAGCCTGAGCATTTTCTGGATGACCTCCGGTTAAATAATCCTTGGCTTGAACTAAAGAGTTTTGCAGACAGCATTGACTTGACTGTGCAAGATCCTGTTGCTCATAAGCACATACCATATGTTGTCATTCTTGTCAAGATGGCTGATGAGTGGGCCAAAAGCCATGGTGGTAAGCTCCCATCAACAAGAGAACAAAAAAAGGAGTTCAAGGATCTTTTGAAGGCCAGGATGGTTTCACAAGATGAAGATAATTATAAAGAAGCTATTGAAGCATCATTCAAAGTGTTTGCTCCCCGAGGAATTAGTTTGGATTTGCAGAGGATACTAAATGATAGTTCTTCTGAGGTGGACTCTAATTCATCAGATTTTTGGGTGTTGGTGGCTGCTCTGAAGGAATTCATTGCAAATGAAGGTGGTGGGGAGGCACCACTTGAAGGATCTATACCAGATATGACATCTTCCACCGAGCAATATATTAATTTGCAGAATATCTATCTAGCTAAGGCTGAGGCTGACTTTCTTGTAATGGAACAACTAGTGAGAAGTATCTTGAAGAAGATTGGTCGAGATTCAAATAGCATTCCAAAGGCAACAATTAGAAGTTTCTGTAAAAATGCAAGAAAACTCAGAGTTTGCAGGTACCGGTCAATTGAAGATGAATTTAATTCTCCAAACCTACCTGAGTTGCAGAAGTACCTAACTGATGAGGATAGCAGCAGTGGCGGAGCCACGTTTGTGGGAAGGGGGGCAATGGCCCCTCCCAAACCTCTAAATTTTCACATTGCTGTAGGAATTTATATTTTGCTTCGTGCTGTGGACCGGTTTGCTGCTAATTACAACAGTTTTCCTGGACAGTTTGACAGTGCAACGGATGAGGATATACCAAGATTGAAGAGCGCAGCTATTAGCCTCCTAAGTGACCTGGGATGCAATGGAACCGCTTTGGCTGAGGACCTCATCAATGAGATGTGTCGATTTGGTGCAGCAGAGCTTCATGCTGTGGCTGCTTTGGTTGGTGGAATTGCATCCCAAGAAGTGATCAAGCTCATAACAAGGCAGTTTGTACCGATGTCCGGAACCTACATCTTCAATGGCATTGACCACAAGTCACAGCTGTTGTCCCTGTAA 1635 0.4275 MAEPKVKYDRQLRIWGEQGQAALEKSSICLLNCGPTGSETLKNLVLGGIGSITVVDGSKVEVGDLGNNFLVDESSVGQSKAKCVSSFLQELNDSVKAKFVEEYPEALIETNPSFFSQFTLVIATQLVESSMIKLDRICREANVILIFARSYGLTGFVRISLKEHTVIESKPEHFLDDLRLNNPWLELKSFADSIDLTVQDPVAHKHIPYVVILVKMADEWAKSHGGKLPSTREQKKEFKDLLKARMVSQDEDNYKEAIEASFKVFAPRGISLDLQRILNDSSSEVDSNSSDFWVLVAALKEFIANEGGGEAPLEGSIPDMTSSTEQYINLQNIYLAKAEADFLVMEQLVRSILKKIGRDSNSIPKATIRSFCKNARKLRVCRYRSIEDEFNSPNLPELQKYLTDEDSSSGGATFVGRGAMAPPKPLNFHIAVGIYILLRAVDRFAANYNSFPGQFDSATDEDIPRLKSAAISLLSDLGCNGTALAEDLINEMCRFGAAELHAVAALVGGIASQEVIKLITRQFVPMSGTYIFNGIDHKSQLLSL* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1812 544 Gene3D - 356 544 - -
Amo13g1812 544 Gene3D - 2 271 - -
Amo13g1812 544 PIRSF APP-BP1 1 544 IPR030667 GO:0019781|GO:0045116
Amo13g1812 544 CDD APPBP1_RUB 7 542 - -
Amo13g1812 544 PANTHER NEDD8-ACTIVATING ENZYME E1 REGULATORY SUBUNIT 2 543 - -
Amo13g1812 544 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 2 543 IPR045886 -
Amo13g1812 544 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 7 540 IPR035985 GO:0008641
Amo13g1812 544 Pfam ThiF family 8 522 IPR000594 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1812 Amo-Chr13 26100755 26107434 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1812 7 195 EF-hand Containing Proteins AT2G30110 24.121 5.48e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1812 K04532 - gmx:100793799 927.161