Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1793 ATGTTGCAGCTACTCTACGCCGCGATCTTCGGCGAAATGCTTCTGATCATGCTTCTCCTTTTCAAGACCCCACTCAGGAAGCTCCTCATCCTCACCTTGGATCGCCTCAAGCGCGGCCGTGGCCCCATCGTCGTCACCACCGTCGGCGCCACATTGGTCGTCGTCCTCGCTTCTAGCCTCTACAGTATGGCCAAGATCCAACGCCGTATCACTGAGGCCGGTGTTGTCAACCCCACCGAACAAGTCCTCATGTCCAAGCACCTTCTCGAAGCTTCTCTCATGGGGTTTGTGCTTTTCCTCTCCCTCATGATAGATAGGTTGCACCATTACATAAGAGAGCTTCGCATGCTCCGAAAGACCATGGAGGCTGTTAAGAAACAAGGCCGAAGTTTCGAGGACGGTAAAAGCACCACCACCTCTGAGGATCATAGAGCGCTGACCGAAGAAATCGCGACATTGAAGGCCCGAATCAAGAATTTGGAAACCGAAAGCGAAGCAAAAGGAAGTAAGGCTAAGTCTTTGGAATCCGAAGTAGAGGCTCTGAAGAAGCAATCCGAAGGGTTCCTTATGGAATATGATCGCCTCTTGGAAGAAAATCAGAACCTTCGGAGTCAGTTAGAGGCCATTGATCAAAGCTCTTTGCATGCTGAGAATAAGAAAAATATGTGA 669 0.5022 MLQLLYAAIFGEMLLIMLLLFKTPLRKLLILTLDRLKRGRGPIVVTTVGATLVVVLASSLYSMAKIQRRITEAGVVNPTEQVLMSKHLLEASLMGFVLFLSLMIDRLHHYIRELRMLRKTMEAVKKQGRSFEDGKSTTTSEDHRALTEEIATLKARIKNLETESEAKGSKAKSLESEVEALKKQSEGFLMEYDRLLEENQNLRSQLEAIDQSSLHAENKKNM* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1793 222 Pfam Bap31/Bap29 cytoplasmic coiled-coil domain 148 203 IPR041672 -
Amo13g1793 222 PANTHER BCR-ASSOCIATED PROTEIN, BAP 1 219 IPR008417 GO:0005783|GO:0006886|GO:0016021
Amo13g1793 222 PANTHER B-CELL RECEPTOR-ASSOCIATED 31-LIKE PROTEIN-RELATED 1 219 - -
Amo13g1793 222 Gene3D - 139 202 - -
Amo13g1793 222 Coils Coil 143 212 - -
Amo13g1793 222 Coils Coil 107 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1793 Amo-Chr13 25741008 25743331 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1793 K14009 - gmx:100820199 305.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1793 13 25741008 25743331 Amo13g1793 13 25741008 25743331 ECH
Amo18g0776 18 11120060 11122013 Amo13g1793 13 25741008 25743331 PCT
Amo13g1793 13 25741008 25743331 Amo18g0776 18 11120060 11122013 PCT