Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1771 ATGGCAAACCAAACCTCTCTTCCCTTCTATGAAAAACATAGGTTCAAATACAATTTCAAGAGAGTAATGGATGTCTTGATCTTAATCCTGCTGCTACTTCTACTTGGTTACCGAGTCATCTCTTTGGTCAACAACTACAGTTTCCATTGGCTTGGTGCTTTGATATGCGAATCATGGTTCACCTTAGTTTGGATTTTCACCATCACCACACAGTGGAATCCTGCTACTATTAAAACCTATCCAGAACGTCTCTTGCAAAGGTTGCAAGAGCTTCCGGCGGTTGATTTATTTGTGACAACAGCAGATCCTGTGCTAGAACCGCCGATAATGACAGTGAACACAGTTTTGTCATTGTTGGCAATGGAATACCCAAGTGACAAGCTAGCATGTTATGTTTCAGATGATGCGTGTTCCCCTCTCACCTTCTACGCTCTTCAAGAAGCTTCTAAATTTGCCAAGCATTGGGTTCCTTTCTGTAAGAAATTCAATGTCCAAGTTAGAGCTCCATTTAAATACTTCTCTCATGTGCCTTATGATCATCACTTATCAACGCAACAATTCAAACAAGAATGCCTAAGGATGAAGGACATGTATGATAATCTTAGCCGCAGAATAGAAGAAGCTTGCCGAACATCAATTCCATCCTGCCCACTTGACGGAGATTTTGCAGTTTTCTTAAACACCCAAAGGGATAATCATCCCACCATAATCAAGATCATATGGGAGAATAAGGAAAAGCATTCAGAAGGGTTGCCACATTTGATCTACATATCAAGAGAGAAAAAGCCAAAGCATCCACATCATTACAAAGCTGGTGCCATGAATGCTTTGACAAAAGTGTCCGGTTTGATGACAAATGCTCCGTTTATTTTGAACGTGGACTGTGACATGTTTGTAAACAATCCAAAGATTGCATTACATGCTATGTGTGTGTTGCTTGATGCTAAGGGACAAAAAGAAGTTGCATTTGTTCAGTGTCCCCAACAATTTTATGGTAAATTGAAGGATGATCCTCTTGGAAATCAAATGGTGGTTCTCTTTAAGTACCTGGTAAATGGATTAGCAGGACTTCAAGGACCTTTTTATGGAGGAACAAACTGCTTCCATAGAAGAAAAGTTATCTATGGTCTTTCGCCAGATGAAGCAGAAAAAGGAAACATGTCATCAGAGAAGGAGCTAAAACAAGAATTTGGTGGTTCAAAAGAGCTTGTGAAATCAGCTGGTGATGTTTTGGAAGGAAGAACATATTCCCCTAATAATGATATCAATATTTCCAAATCACTTGAGTCAGCAAATCAAGTTGCTAGCTGTGGATATGAATATGCCACTGGCTGGGGAGATCAGATTGGTTGGAAATATGGATCAATAACAGAGGATGTTCTAACTGGACTTTCAATCCATAAAAAGGGTTGGAGATCTGAATTCTGCACACCAGACCCGATTGCTTTCACAGGCTGTGCACCAATTGGGCTTCCAGCATCAATGGGCCAACAGAAAAGATGGGCCACTGGAATGCTTGAGATCTTCCTTAGTAAGAAGTATTGTCCACTTGTTTGCACCATTTTTGGCAAATTACATTTTAGGCAATTCTTGGCTTATATGTGGATTATGAATTGGGGCTTCCAACCACTTTTTGAAGTCTCTTATGTTTCTCTCCTTACCTATTGCGTTATCACCAACTCCAATTTCATGCCTCAGGGACCAGCCCTATCAATTCCTATTACTCTTGTTGTAATTTATATGCTACATACAATATTAGAGTACTTGGCAACAAAGCTATCAATCCAAGAGTGGTGGAACAATCAAAGAATGTCAAGAATATACATCATGAATGCTAGGTTCAGTGGATTTCTTGCCCTGATTCTTAAGCTTCTAAGAATATCCAACACTGTCTTTGACATTACAAGGAAAGATCAAAATTTCTCTAGTGATGATGGTGAAGATTGCTTAGATAATAACATTAATGATGATGCTGGTACCTTCACATTTGATGAATCCTCAGTTTTTGTTCCAGGAACTACTATTTTGCTAATGCAATTGGCAGCAATGGTCATCAAAATTATTGGATTAGTGGGATCAAGGAGTGGGAATAATAATAAGAATAATGGGTATGGATCAGTATGCGACATGTTATGTAGTTTGTATTTGATTCTTTGCTATTGGCCATTTTTGAGAGGGATATTTAGAAGGGGCAAATATGGAATTCCATTTTCCACAATTTTCAAGTCAGCAACACTGGCATTTCTTTTTGTGAGTCTATGTACACAGACACAGACCATTAGTGGTTAA 2289 0.3897 MANQTSLPFYEKHRFKYNFKRVMDVLILILLLLLLGYRVISLVNNYSFHWLGALICESWFTLVWIFTITTQWNPATIKTYPERLLQRLQELPAVDLFVTTADPVLEPPIMTVNTVLSLLAMEYPSDKLACYVSDDACSPLTFYALQEASKFAKHWVPFCKKFNVQVRAPFKYFSHVPYDHHLSTQQFKQECLRMKDMYDNLSRRIEEACRTSIPSCPLDGDFAVFLNTQRDNHPTIIKIIWENKEKHSEGLPHLIYISREKKPKHPHHYKAGAMNALTKVSGLMTNAPFILNVDCDMFVNNPKIALHAMCVLLDAKGQKEVAFVQCPQQFYGKLKDDPLGNQMVVLFKYLVNGLAGLQGPFYGGTNCFHRRKVIYGLSPDEAEKGNMSSEKELKQEFGGSKELVKSAGDVLEGRTYSPNNDINISKSLESANQVASCGYEYATGWGDQIGWKYGSITEDVLTGLSIHKKGWRSEFCTPDPIAFTGCAPIGLPASMGQQKRWATGMLEIFLSKKYCPLVCTIFGKLHFRQFLAYMWIMNWGFQPLFEVSYVSLLTYCVITNSNFMPQGPALSIPITLVVIYMLHTILEYLATKLSIQEWWNNQRMSRIYIMNARFSGFLALILKLLRISNTVFDITRKDQNFSSDDGEDCLDNNINDDAGTFTFDESSVFVPGTTILLMQLAAMVIKIIGLVGSRSGNNNKNNGYGSVCDMLCSLYLILCYWPFLRGIFRRGKYGIPFSTIFKSATLAFLFVSLCTQTQTISG* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1771 762 SUPERFAMILY Nucleotide-diphospho-sugar transferases 108 550 IPR029044 -
Amo13g1771 762 Pfam Glycosyl transferase family group 2 435 574 IPR001173 -
Amo13g1771 762 Pfam Cellulose synthase 94 385 IPR005150 GO:0016020|GO:0016760|GO:0030244
Amo13g1771 762 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 2 757 - -
Amo13g1771 762 PANTHER CELLULOSE SYNTHASE H1-LIKE PROTEIN 2 757 - -
Amo13g1771 762 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 198 380 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1771 Amo-Chr13 25384069 25398443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1771 43 753 Glycosyltransferase AT2G32540 48.143 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1771 - - aip:107632722 1406.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1771 13 25384069 25398443 Amo13g1771 13 25384069 25398443 ECH