Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1762 ATGACTCTGCTTCGATGGCTTGCGATTCTGTTCCTTCTGCTCGCCGTGTACTGCGGTCTCGATCCGTTTCGTCACAGCCCCATAGCCAGCTTCCCGGAATTCGAGGCCAAACTGATTCAAATGCCGCCGTGGTCCGAGGTGCCGCCGGAGAAAGACTCGGAGAATTTGTTGCAGAAATCGGAGGTGAAGTTCTTGAACGAGGTTCAGGGACCAGAGAGCGTTGCTTTCGACCCTCAAGGTCGCGGTCCTTACACTGGTGTCGCTGATGGAAGGATTCTCTTCTGGAATGGACACTCTTGGCTTCCCTTTGCTTATACCTCTCCCAACAGGTCAGAATTGTGTGATCCTAAAGTTTCTGCATCACCACTTAGCTATGTGACGACCGAGCACATCTGCGGAAGGCCTTTGGGACTCAGGTTCAACAAGAAAACTGGCGATTTATACATTGCGGAYGCATATTTTGGGCTTCTGAAGGTGGGGCCTGAGGGTGGTTTAGCAACACCTCTTACAACTGAGGCTGAAGGGGTGCCATTCAGGTTTACCAATGATGTTGATGTTGACGAAGAAGGGAATGTTTATTTTACGGATAGCAGTGCGAAATATCAGCGCAGGAACTTTATTCAACTGGTATTTGCTGGAGAYGATAGCGGCAGAGTTTTGAAATACAACCCTGACACTAAGGAAACCACAGTTCTTGTGAGAAACATTCAATTTCCAAATGGCATTTCCTTAAGCAAAGATCGTTCCTTCTTTTACGTCTGTGAAGGTGTTGTTGGCAGGCTACGCAAATACTGGCTGAAAGGCRAAAAGGCYGGGACTTCAGAGATCATAGCCATCCTGCCTGGAATCCCTGACAATGTGAGAGTCAATGAAGATGGCGATTTTTGGATTGCACTTCATTGCCGAAGGTATATGTATGCGTACCTTAATGCCCTCTATCCAAATATTCGGAAACTCATACTCAAGCTCCCTATACCAACAAAGATTCACTACCTGCTTCAAATTGGTGGCCGGCAACATGCGTTGGCTGTTAAGTACAGCTCCGAAGGCAAACTTCTGCAGATATTGGAGGATAGCGAGGGAAAAGTTGTTAGAGCAGTGAGTGAAGTGGAGGAGAGAGATGGTAAACTATGGATGGGAAGTGTTCTTATGCCTTTTATTGGAGTTTACAACTTGAAATGA 1182 0.4687 MTLLRWLAILFLLLAVYCGLDPFRHSPIASFPEFEAKLIQMPPWSEVPPEKDSENLLQKSEVKFLNEVQGPESVAFDPQGRGPYTGVADGRILFWNGHSWLPFAYTSPNRSELCDPKVSASPLSYVTTEHICGRPLGLRFNKKTGDLYIADAYFGLLKVGPEGGLATPLTTEAEGVPFRFTNDVDVDEEGNVYFTDSSAKYQRRNFIQLVFAGDDSGRVLKYNPDTKETTVLVRNIQFPNGISLSKDRSFFYVCEGVVGRLRKYWLKGXKAGTSEIIAILPGIPDNVRVNEDGDFWIALHCRRYMYAYLNALYPNIRKLILKLPIPTKIHYLLQIGGRQHALAVKYSSEGKLLQILEDSEGKVVRAVSEVEERDGKLWMGSVLMPFIGVYNLK* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1762 393 Pfam Strictosidine synthase-like, N-terminal 65 94 - -
Amo13g1762 393 PANTHER STRICTOSIDINE SYNTHASE TRANSCRIPTION FACTOR WD40-LIKE FAMILY-RELATED 8 392 - -
Amo13g1762 393 Pfam Strictosidine synthase 182 268 IPR018119 GO:0009058|GO:0016844
Amo13g1762 393 SUPERFAMILY Calcium-dependent phosphotriesterase 40 392 - -
Amo13g1762 393 Gene3D - 53 393 IPR011042 -
Amo13g1762 393 PANTHER STRICTOSIDINE SYNTHASE-RELATED 8 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1762 Amo-Chr13 25251598 25255439 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1762 - - gmx:100803331 665.611