Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1723 ATGGATTTTCCAAAGCTCAACATTCTTCTATGCTTGTCCATCTTCCTTCTTTCATCCTTTCGCGCTCATGCCAAAGTCGAATTTGACTACTGCGATAAGAAGGCAAACTATGATGTGAAGGTTTCTGCAGTTGAAATATCTCCAGAGCCTGTTGTTAGTGGGAAACCTGCTACCTTTAAAATTAAAGCTTCTTCTGGTCAAGCTATTTCTGGAGGGAAGTTGGTAATTGCAGTTTCGTATCTTGGGATACCTGTCCGTACTGAAAATCATGATTTTTGTGAAGAAGTATCCTCCTGCCCTGTCTCTTCTGGAGACTTTGTGATTTCCCACACCCAGACATTGCCTTCATTTACTCCACCGGGATCCTACACTCTGAAGATGACACTGAAGGATAACAAAGATGAGCTCTTAACTTGCATTAAGTTTAGCTTCACAATCAAATTTGGATCCATGGTGTCGGATGCCTAA 468 0.4167 MDFPKLNILLCLSIFLLSSFRAHAKVEFDYCDKKANYDVKVSAVEISPEPVVSGKPATFKIKASSGQAISGGKLVIAVSYLGIPVRTENHDFCEEVSSCPVSSGDFVISHTQTLPSFTPPGSYTLKMTLKDNKDELLTCIKFSFTIKFGSMVSDA* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1723 155 PANTHER NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED 8 153 IPR039670 -
Amo13g1723 155 SUPERFAMILY E set domains 25 147 IPR014756 -
Amo13g1723 155 Pfam ML domain 26 146 IPR003172 -
Amo13g1723 155 Gene3D - 24 148 - -
Amo13g1723 155 SMART pgtp_13 28 144 IPR003172 -
Amo13g1723 155 CDD PG-PI_TP 28 144 IPR033917 GO:0032366
Amo13g1723 155 PANTHER LEGUMINOSIN GROUP578 SECRETED PEPTIDE 8 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1723 Amo-Chr13 24483822 24488100 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1723 - - pvu:PHAVU_011G100100g 200.29