Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1672 ATGATGGCGAAACCGGAGAATATTGAATTGGGGGTCAAGAAGACGGGATCATCGGTCTACGCTCAATGCAATTCAGCAAAAGTGCACCCTTCCAATGATCCCGAATCGGATCCTGATTCCTTAGCCCTCGAGAAATTCAGGCTCTATGAAACCAGAGCGCGGTTCTACCTGATCGGGAGTGATCGCCACAAGAGGTTCTTCCGAGTACTGAAAATCGATCGATCAGAGCCCTCTGATTTGAATATCAGCGAAGACCCTGTCTTGTATTCCCCACATGAAATCAAAAGCCTCCTTCAGCGTATTGCCGAAGGCAATAGGGCCACCGGCGGCCTCACTTTCGTCGCCAAGGTCTTTGGAATTGCCGGGTGCATTAGGTTTCTGGAATCCTATTATTTGATTCTTGTTACTAAGCGTAGACAAATTGGTTCCATATGTGGTCATGCTATCTATAGCATCAGAGAAAGTCAATTGATTACAATTCCGCATGTTACAATTCAATCTGACGTAGCTCACTCTAAAACTGAGCAAAGGTACAAAAAGCTTCTCTCCAGTGTCGATTTGACGAAGGACTTCTTTTTTAGTTACACTTACCCTATTATGCAAAGTTTGCAAAAGAATGTCTCGACTGATCCAGATGGAGGGATGTCGTATGATAATATTTTCGTTTGGAATGCTTATTTAACACAAGCAATCAGATCAAGATGCAACAACACCATTTGGACCATAGCTTTAGTTCATGGCCATTTTAGGCAGGCTCGCCTATCAATCTTTGGAAGGGACTTCGGTGTTACCTTGATTTCTAGACGTTCTAGACATTTTGCAGGCACACGGGAAGGATTGAAGGAGGAGGAGCAACAAACCAGTTACTTGAAAAGGGGGGTGAATGACCGCGGGAGAGTTGCTAATGATGTTGAGACAGAGCAGATTGTCCTTGATGAAGAAGCTGGCTCTTGCAAGGGTAAAATGAGTTCAGTTGTGCAAATGCGAGGGTCAATACCACTTTTCTGGTCACAAGAAGCTTCGAGATTTAGCCCTAAGCCTGACATAATCTTGCAGAGGTATGATCCAACATATCAGGCAACAAAATTACATTTTGAAGATCTTGCTAAGAGATATGGCAATCCGATTATTGTGCTTAATTTGATTAAGACAGTTGAGAAACGACCTCGAGAAATGATGCTTAGGCGTGAATTTGCAAATGCTGTTGGGTATCTGAACCAAATTCTACCTGCAGAAAATCATCTTAAATTTATTCACTGGGACTTTCACAAGTTTGCAAAGAGCAAGTCCGCCAATGTTTTGGCAGTTTTAGGAGCTGTAGCAAGCGAAGCACTTGAATTAACAGGCTTTTACTACAGTGGTAAACCCACCATCATAAAGAGGACCAACAAGAGCAACAGAACAAGTTCAGGGATGGATGCTTCACTTAGAGATCTTAGAGCTAGTTCTGGGGACCTTACAAGAATTGGAACTGCTAGTGAAATGCTAAATTCTCTGGTCATTCGAGACAGAGAAAATGATGCGAGCCATCAGAACCAAAAGATGAGTGCTAGTGGTGATGCACCACGCTATCAGAGTGGAGTTCTACGTACCAACTGCATTGATTGCTTGGACCGTACAAATGTTGCCCAGTATGCTTATGGACTTCAAGCTTTAGGACGTCAGCTCCATGCAATGGGTTTGACTGATGTGCCAAAAGTGGATCCTGATAGTAGTATTGCTGCTGCACTAATGGACATGTATCAAAGTATGGGAGATGCACTTGCACAGCAATATGGCGGTTCTGCAGCTCACAATACTGTGTTTCCTGAAAGGCAGGGAAAATGGAAAGCAACAACACAATCAAGGGAGTTTTTAAAATCTATAAAACGATACTATAGCAATGCATATACTGATGGTGAAAAACAAGATGCAATAAACTTATTTTTAGGTTACTTCCAACCACAGGAAGGGAAACCTGCTCTGTGGGAGCTTGATTCGGATTATTATCTCCATGTATCTGGTATTGGGGATGATCTGATTCCTGAGAGTTGTTGCGAACTGAATGCCAAGCCTGCCGGAAGTAATGGAATGACATTCACACCTATACCAGCTTGCAGAGAAGACTTCTGCCGCATAAAATTGACTTCATTTGACAAGTTGATTGAAAAGACCTGTAGCGCCATTAAAAATGTAAGGCTTTGCAGTGAACCTGATCAAAGACCAGGTGGTGTCTCTGGAAGCAGCGGTGTTGCACCTGATGCAGCTGAGATACAACTTAAAAGCCCCAATTGGCTTTTTGGCCAGAGAAAGTATGAAGAAAGCTCCTCTGCTGCAAAAGCTACTACTCGAGAAATTGACATTGAAGGATCTCAGGTTAATGGCTTTTGCAACTTGAATTGGCTTTCATCTAGCGGTGATATGAATGAAGAGGATGTTTTTCAAAGGTACCTCACAATGACCTCGGCGAATGAGGCCAACGGCTGGTATGGAGGTACCCTCCTTGGTGATCAAGATGAAAGCAGTGAGATATATAAACATTATGCTGATCTGTGCCAGGGACCTTCATTGGAACTCTTCCAAAATGACCCAGAGAGAGAGCAACACTATGCAAATGCTTTGAGCACAAGTTCATTTGAAATTCTAAATGATGGTGCCATTGCCGTGGAAATGGAAGCAGCTCTAAAGGAGTATGAACATGTTGGGACTGACCTTGGAATCATTCCCACATCTTGTAAATTCTTCGCCGATGATCCAAGCTGGTTGACCAGATGGTTAATTGGGGAAGAAAAAGTACCTAGGGTATCGTGA 2790 0.4315 MMAKPENIELGVKKTGSSVYAQCNSAKVHPSNDPESDPDSLALEKFRLYETRARFYLIGSDRHKRFFRVLKIDRSEPSDLNISEDPVLYSPHEIKSLLQRIAEGNRATGGLTFVAKVFGIAGCIRFLESYYLILVTKRRQIGSICGHAIYSIRESQLITIPHVTIQSDVAHSKTEQRYKKLLSSVDLTKDFFFSYTYPIMQSLQKNVSTDPDGGMSYDNIFVWNAYLTQAIRSRCNNTIWTIALVHGHFRQARLSIFGRDFGVTLISRRSRHFAGTREGLKEEEQQTSYLKRGVNDRGRVANDVETEQIVLDEEAGSCKGKMSSVVQMRGSIPLFWSQEASRFSPKPDIILQRYDPTYQATKLHFEDLAKRYGNPIIVLNLIKTVEKRPREMMLRREFANAVGYLNQILPAENHLKFIHWDFHKFAKSKSANVLAVLGAVASEALELTGFYYSGKPTIIKRTNKSNRTSSGMDASLRDLRASSGDLTRIGTASEMLNSLVIRDRENDASHQNQKMSASGDAPRYQSGVLRTNCIDCLDRTNVAQYAYGLQALGRQLHAMGLTDVPKVDPDSSIAAALMDMYQSMGDALAQQYGGSAAHNTVFPERQGKWKATTQSREFLKSIKRYYSNAYTDGEKQDAINLFLGYFQPQEGKPALWELDSDYYLHVSGIGDDLIPESCCELNAKPAGSNGMTFTPIPACREDFCRIKLTSFDKLIEKTCSAIKNVRLCSEPDQRPGGVSGSSGVAPDAAEIQLKSPNWLFGQRKYEESSSAAKATTREIDIEGSQVNGFCNLNWLSSSGDMNEEDVFQRYLTMTSANEANGWYGGTLLGDQDESSEIYKHYADLCQGPSLELFQNDPEREQHYANALSTSSFEILNDGAIAVEMEAALKEYEHVGTDLGIIPTSCKFFADDPSWLTRWLIGEEKVPRVS* 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1672 929 Pfam SacI homology domain 118 425 IPR002013 GO:0016791
Amo13g1672 929 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 42 856 IPR043573 GO:0043813|GO:0046856
Amo13g1672 929 ProSiteProfiles Sac phosphatase domain profile. 182 594 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1672 Amo-Chr13 23276655 23284981 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1672 2 928 Acyl Lipid Metabolism Gene Families AT1G22620 73.899 0.0 1432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1672 K22913 - gmx:100800092 1598.95