Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1656 ATGGAAGGTTACGAGCTGATGAGTTTTCGGGGCCCTGACGTGAGCTGTGTGGACATCAGGCCGGGAGGGCAGGGCAGATCGTTAACAATATCAGCTATGCTTCCTTCTCTCAACAATCCGGAGTGCCAAGTTGGCAGGAAACTGGGATCATGCGCAACTGAAACTCAAGTAATCTTGTTCTTTATCTCACTTTATCTGGTGGCCATTGGACAAGGTGGACATAAGCCCTGTGTTCAGGCATTTGGAGCCGATCAATTTGATGAACAGCATCCGAAGGAGCTCAAGGATAGAAGCTCGTTCTTTAACTGGTGGTATTTCACAATGTGTGCAGGTTGCATGGGAACTCTTTGGATTTTGAACTATATACAGGACAACCTTAGTTGGGTCGTTGGATTTGGAATCCCTTGTGCGGTGATGATCATTGCATTGCTTGTTTTCATTCTTGGAACATGGACCTACAGGTTTAACGTCAAGGGCCATGGCAAGAGCCCTTTTCTCAGAATTGGTCGTGTCTTTGTTACAGCTGCGGGAAATCGGCAAGCAGAAACCATCCAAGAGGAAACTAGTGGAACACTCCCTCCTCAAATTTCCCAACAGTTCAACTTCCTCAACAAAGCATTATTAGCACCAGACTGTTCCATCAAAGAAGGGAATGTCGCGGGTAGCGTCGTGGAGGTGGAAGAAGCAAAGGCAGTACTAAGGCTGGTTCCTATTTGGGCAACAACTCTGCCGTTCGCTATTGTGTTTGCTCAAGCCCCTACCTTCTTCACGAAGCAAGGATTTACGTTGGATCGCACCATATTTCCGGGCTTTGACATACCTGCTGCTTCTCTTCAAACGCTTATTGCACTTGCCATTGTTGTCATCAGTCCCATCTATGACCGCATATTTGTGCCAATAGCTAGAGCCATCACCAGGCAACCCTCCGGCATCACAAAGCTACAAAGAATTGGGATTGGGATTTTTATATCGATATTTAATGTAATATTTGCGGCTCTTGTTGAGATGAAAAGACTGCAAACAGCACAAGAGTTTGGTCTTGTTGATGAACCGGATGCAACCATTCCCATGAGTATGTGGTGGTTGATTCCCCAGTACCTCTTGCTTGGAGCTGCAGAAGTTTTCACCATGGTTGGTCTGCAGGAGTTTTTCTATGATCAGGTTCCCGATGAACTACGAAGCATGGGTCTTGCTCTGTACTTGAGCATCTTTGGTGTGGGAAACTTTCTAAGCGGCTTTCTGATTTCGGTTATTGAAGGAGTGACAGGCAGCGATGGACATGACAGTTGGTTTGCTGATAATCTGAATAAGGCGCATCTTGATTACTTCTACTGGCTACTTGCTGCCCTTAGTGTCATCGGATTTACTCTCTTCATTTGCTTTGCAAAATCCTACATAACTGTCCTCCATTCCAAACCATCGATGGCCATATCCGGGGAGGTTTCCTCAGAATTGGAAGCTCCTCTGGTTGCTGACACAGATAATACCGTGAACGGCGCCGTTGACTACAAGGGACGACCTTCCATCAGATCCAAATCTGGCTCGTGGAGATCTGCTCGCTTTATCATAGGTGTGGAAGTGGCAGAGAGGGTGGCGTTCTATGGAATTGAGGCGAACCTGATATCGTATCTTACGGGCCCGCTGAAGCAGAGCACGGCGGCCGCAGCCGAAAATGTCAACATATGGTCGGGAGCATCCTCCCTGCTTCCCCTCTTTGGAGCATTCATCGCCGATTCCTACCTTGGACGTTACCGCACTATCATTCTCGCCTCCATCATCTATATTTTGGGGCTAGGATTGTTAACACTATCAGCGTTGCTTCCTTCTCTCATCAATTCGGAGTGCCAGGTTGGCAGCAAATTGGGATCATGCTCTACGGAATCTCAAGTAATCTTGTTCTTCATCTCACTTTATCTGGTGGCCATTGGGCAAGGTGGACATAAGCCCTGTGTTCAGGCATTCGGAGCAGACCAATTTGATGAACAGCATCCGAAGGAGCTCAAAGATAGAAGCACATTCTTTAACTGGTGGTATTTCACAATGTGTGCAGGTTGCATGGGAACTCTCTGGATTTTGAACTATATACAGGACAACCTTAGTTGGGTCGTTGGATTTGGAATCCCTTGTGCTGTGATGATCATTGCATTGCTTGTTTTCTATCTGGGAACATGGACCTACAGGTTTAACATCAAGGGCCATGGCAAGAGCCCCTTTGTCAGAATTGGTCGTGTCTTTATTACAGCCGCAAGAAATCGCCAAGCAACAGCCATCCAAGAGGAAACTGGGGGAACACTCCCTCCAAAAAGTTCCCAACAGTTCAACTTCCTCAACAAAGCATTAATAGCACCAGACTGTTCCACCAAAGAAGGGGAGGTCACATGTAGTGTCGTGGAGGTGGAAGAAGCAAAGGCTGTACTAAGGCTGGTTCCTATTTGGGCAACAACTCTGCCGTTTGCTATTGTGTTTGCTCAATCCCCTACCTTCTTCACGAAGCAAGGATTTACACTGGACCGCAACATATTTCCAGGCTTTGACATACCTGCAGCTTCTCTGCAAACCCTTATCACACTTGCCATTATTGTCATCAGTCCCATCTATGACCGCATATTTGTGCCAATAGCAAGAGGAATCACTGGGCGACCCTCCGGCATCACAATGCTGCAAAGAATTGGGATTGGGATTTTTATATCGATATTTACTGTCATAATTGCGGCCCTTGTTGAGATGAAAAGACTGCAAACAGCACAAGAGTTTGGACTTGTTGATGAACCGGATGTAACCATTCCCATGAGCATGTGGTGGTTGATTCCCCAGTACTTCTTGCTTGGAGCTGCACAAGTCTTCACCATGGTTGGTCTGCAGGAATTTTTCTATGATCAGGTCCCGAACGAACTGCGAAGCATGGGACTTGCTCTGTACTTGAGCATCTTTGGTGTGGGAAGCTTTCTAAGTAGCTTTCTGATTTCAGTTATCGAAGAAGTGACAGGCAGAGATGGACATGAAAGTTGGTTTGCTAATAATCTGAATAAGGCGCATCTTGATTACTTCTACTGGCTACTTGCTGCCCTTAGTGTCATCGGATTCAGTCTCTTCATTTGCTTTGCAAAATCCTACATTTATAATCACAAAGGAATTTCTCGAGGATAA 3147 0.463 MEGYELMSFRGPDVSCVDIRPGGQGRSLTISAMLPSLNNPECQVGRKLGSCATETQVILFFISLYLVAIGQGGHKPCVQAFGADQFDEQHPKELKDRSSFFNWWYFTMCAGCMGTLWILNYIQDNLSWVVGFGIPCAVMIIALLVFILGTWTYRFNVKGHGKSPFLRIGRVFVTAAGNRQAETIQEETSGTLPPQISQQFNFLNKALLAPDCSIKEGNVAGSVVEVEEAKAVLRLVPIWATTLPFAIVFAQAPTFFTKQGFTLDRTIFPGFDIPAASLQTLIALAIVVISPIYDRIFVPIARAITRQPSGITKLQRIGIGIFISIFNVIFAALVEMKRLQTAQEFGLVDEPDATIPMSMWWLIPQYLLLGAAEVFTMVGLQEFFYDQVPDELRSMGLALYLSIFGVGNFLSGFLISVIEGVTGSDGHDSWFADNLNKAHLDYFYWLLAALSVIGFTLFICFAKSYITVLHSKPSMAISGEVSSELEAPLVADTDNTVNGAVDYKGRPSIRSKSGSWRSARFIIGVEVAERVAFYGIEANLISYLTGPLKQSTAAAAENVNIWSGASSLLPLFGAFIADSYLGRYRTIILASIIYILGLGLLTLSALLPSLINSECQVGSKLGSCSTESQVILFFISLYLVAIGQGGHKPCVQAFGADQFDEQHPKELKDRSTFFNWWYFTMCAGCMGTLWILNYIQDNLSWVVGFGIPCAVMIIALLVFYLGTWTYRFNIKGHGKSPFVRIGRVFITAARNRQATAIQEETGGTLPPKSSQQFNFLNKALIAPDCSTKEGEVTCSVVEVEEAKAVLRLVPIWATTLPFAIVFAQSPTFFTKQGFTLDRNIFPGFDIPAASLQTLITLAIIVISPIYDRIFVPIARGITGRPSGITMLQRIGIGIFISIFTVIIAALVEMKRLQTAQEFGLVDEPDVTIPMSMWWLIPQYFLLGAAQVFTMVGLQEFFYDQVPNELRSMGLALYLSIFGVGSFLSSFLISVIEEVTGRDGHESWFANNLNKAHLDYFYWLLAALSVIGFSLFICFAKSYIYNHKGISRG* 1049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1656 1048 PANTHER PEPTIDE/NITRATE TRANSPORTER PLANT-LIKE PROTEIN 27 468 - -
Amo13g1656 1048 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 573 597 IPR018456 GO:0006857|GO:0016020|GO:0022857
Amo13g1656 1048 CDD MFS_NPF5 516 1040 IPR044739 GO:0042937|GO:0042938|GO:0071916
Amo13g1656 1048 Gene3D MFS general substrate transporter like domains 26 471 IPR036259 -
Amo13g1656 1048 Gene3D MFS general substrate transporter like domains 489 1046 IPR036259 -
Amo13g1656 1048 PANTHER PEPTIDE/NITRATE TRANSPORTER PLANT-LIKE PROTEIN 500 1044 - -
Amo13g1656 1048 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 27 468 IPR000109 GO:0016020|GO:0022857|GO:0055085
Amo13g1656 1048 Pfam POT family 584 1003 IPR000109 GO:0016020|GO:0022857|GO:0055085
Amo13g1656 1048 Pfam POT family 28 428 IPR000109 GO:0016020|GO:0022857|GO:0055085
Amo13g1656 1048 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 500 1044 IPR000109 GO:0016020|GO:0022857|GO:0055085
Amo13g1656 1048 SUPERFAMILY MFS general substrate transporter 53 463 IPR036259 -
Amo13g1656 1048 SUPERFAMILY MFS general substrate transporter 518 1036 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1656 Amo-Chr13 22861374 22873425 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1656 28 467 Organic Solute Cotransporters AT1G22540 61.036 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1656 - K14638 egr:104449841 1210.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1656 13 22861374 22873425 Amo13g1656 13 22861374 22873425 ECH