Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1655 ATGGCTGAGGAACCACAGAAACCAGCTGAGGAAGTGGTGGCCGCCGTAGCTCAGCCTGAGACGGAGGCCCAGCCGGACAAACCTGTTCCTGAGACAGATAAGGAGACACAGGCCGATAAGGCAGAGGCGGCAGTGCCTGAGGCTGAGAAGAAGGAGGGCGATGCTGTTGTAGTGACAGAGAAGGCAGTGGAAGGAGAAGCGGCGGAGTCGGAGGCGGAGAAGCCCGTTGAAGGGAAAAATCAGATAGCGCAATCGGTGTCTTTCAAGGAGGAGAGCTACGTGGTTGGCGACCTCCCCGAAGCACAGAAGAAGGCTCTCGATGACCTCAAGAACCTCATTCAAGAAGCCCTCAATAAGCACGAGCTCTCCTCTCCTCCTCCCCCTCCACCGCCAAAAGAAGAAGACAAGAAGAAAGAAGAGGCCGTTGCAGCTGCCGAAGAGAAGAAGGAAGAGGTAGAAGAGAAGAAGGAGGAAGCTGCAGCAGCCGAGGAAGAGAAGAAGGAAGAGGTGGTAGCAGCTGAGGAGAAGAAGGAAGAGGTGGTAGCGGCAGCCGAGGAAGAGAAGAAGGAGGAAGCTGCGGCAGCCGAGGAAGAGAAGAAGGAAGAGGTAGTAGCAGCAGCTGAGGAACCTAAAGTGGAAGAAAAAGCAGAAGCGGAAGTGAAGAAGGAGACGGTGGAGGTGGTGGAGAAAACAGAGGACGGTGCCAAGACGGTAGAAGCCATAGAGGAGAGCGTAGTGTCGGTGAAAGTGGAGGAAGAAGGTCCTTCAAGTTCAGCAGTAGCCGTGGAGGAGGACAAGAAGGAAGAAGAGGCAGCTCCTCCTCCGCCGCAAGCTCCAGAGGAAGTGTCGATATGGGGAATCCCACTGCTGGCAGACGAGAGGAGTGACGTCATCCTGCTCAAGTTCCTGAGAGCGAGGGACTTCAAGGTGAAGGACGCCTTCACGATGATCAAGAACACCGTCCGATGGCGCAAGGAATTCGGAATCGATTCCCTGATCGAGGAAGATCTCGGAAGCGATTGGGACAAGGTGGTGTTCACTCAAGGGGTCGATAAAGAAGGGCACCCGGTGTGCTACAACGTCTTCGGAGAATTCGAGAACAAGGAGCTTTACCAGAAGACGTTCTCCGACGAGGAGAAGCGCCAGAAATTCATCAGGTGGAGGATCCAGCTTCTGGAAAAGAGCGTCAGGAAGCTTGACTTCAGTCCGAGAGGGATCTCCACCATCGTGCAGGTCAACGATCTCAAGAACTCACCTGGACAACTGAGCAAGAGGGAGCTCAGGCAGGCTACTAACCAGGCCCTCCAACTGCTTCAGGATAACTACCCTGAGTTCGTTGCCAAGCAGGTGTTTATCAATGTGCCATGGTGGTACCTTGCCTTTTCAAGGATGATAAGTGCTTTCCTGACCCAGAGGACCAAGAGCAAATTTGTATTTGCTGGACCATCCAAGTCTGCTGAAACCCTTTTCAAGTACATAGCCCCGGAGCAAGTGCCGGTTCAATACGGTGGACTAAGCAGAGAGGGTGAGCAAGAATTCAGTACCGCCGATCCTGTTACAGAGGTTACAATCAAACCAGCAACAAAGCACACCGTCGAGTTCTCATTTGCTGAGAAGAGCCACCTTGTCTGGGAGCTTAGAGTTGTGGGTTGGGATGTGAGCCACGGGGCTGAATTTGCGCCCAGCGCCGACGATGGATACACGGTGATAGTACAGAAGAGCAGGAAAATCGCCCCGGCGGATGAAACAGTGATTTGCAACAGCTTCAAAGTGGGCGAACCTGGCAAGGTCGTGCTCACCATCGATAACCAAACATCCAAGAAGAAGAAACTCCTCTACAGGTCCAAGACCACACCCATCTCTGAATAG 1869 0.5345 MAEEPQKPAEEVVAAVAQPETEAQPDKPVPETDKETQADKAEAAVPEAEKKEGDAVVVTEKAVEGEAAESEAEKPVEGKNQIAQSVSFKEESYVVGDLPEAQKKALDDLKNLIQEALNKHELSSPPPPPPPKEEDKKKEEAVAAAEEKKEEVEEKKEEAAAAEEEKKEEVVAAEEKKEEVVAAAEEEKKEEAAAAEEEKKEEVVAAAEEPKVEEKAEAEVKKETVEVVEKTEDGAKTVEAIEESVVSVKVEEEGPSSSAVAVEEDKKEEEAAPPPPQAPEEVSIWGIPLLADERSDVILLKFLRARDFKVKDAFTMIKNTVRWRKEFGIDSLIEEDLGSDWDKVVFTQGVDKEGHPVCYNVFGEFENKELYQKTFSDEEKRQKFIRWRIQLLEKSVRKLDFSPRGISTIVQVNDLKNSPGQLSKRELRQATNQALQLLQDNYPEFVAKQVFINVPWWYLAFSRMISAFLTQRTKSKFVFAGPSKSAETLFKYIAPEQVPVQYGGLSREGEQEFSTADPVTEVTIKPATKHTVEFSFAEKSHLVWELRVVGWDVSHGAEFAPSADDGYTVIVQKSRKIAPADETVICNSFKVGEPGKVVLTIDNQTSKKKKLLYRSKTTPISE* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1655 622 MobiDBLite consensus disorder prediction 101 115 - -
Amo13g1655 622 MobiDBLite consensus disorder prediction 259 274 - -
Amo13g1655 622 Gene3D - 339 509 IPR036865 -
Amo13g1655 622 Pfam CRAL/TRIO domain 343 504 IPR001251 -
Amo13g1655 622 PANTHER PATELLIN-1 1 622 IPR044834 GO:0008289
Amo13g1655 622 MobiDBLite consensus disorder prediction 26 76 - -
Amo13g1655 622 ProSiteProfiles GOLD domain profile. 486 617 IPR009038 -
Amo13g1655 622 CDD SEC14 340 505 IPR001251 -
Amo13g1655 622 MobiDBLite consensus disorder prediction 1 220 - -
Amo13g1655 622 Pfam CRAL/TRIO, N-terminal domain 270 319 IPR011074 -
Amo13g1655 622 SMART sec14_4 338 507 IPR001251 -
Amo13g1655 622 SUPERFAMILY CRAL/TRIO N-terminal domain 95 336 IPR036273 -
Amo13g1655 622 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 519 617 IPR036598 -
Amo13g1655 622 Coils Coil 135 209 - -
Amo13g1655 622 PANTHER PATELLIN-LIKE PROTEIN 1 622 - -
Amo13g1655 622 MobiDBLite consensus disorder prediction 130 220 - -
Amo13g1655 622 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 334 510 IPR001251 -
Amo13g1655 622 SMART CRAL_TRIO_N_2 295 320 IPR011074 -
Amo13g1655 622 Gene3D GOLD domain 510 618 - -
Amo13g1655 622 MobiDBLite consensus disorder prediction 248 281 - -
Amo13g1655 622 Gene3D - 262 326 - -
Amo13g1655 622 SUPERFAMILY CRAL/TRIO domain 344 506 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1655 Amo-Chr13 22803312 22806451 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1655 299 499 Acyl Lipid Metabolism Gene Families AT1G55840 28.837 2.01e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1655 - K19996 rcu:8281630 604.749