Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1643 ATGAGAACGGCGAATTTGAAATACCTGTGTAGGAGAGTGTTGCCTGGGTGGACTTGGAAGGTAGAAGGAAGCGGTTATCGGCTTTATTCGAAGGCAAGCTCTGCCTCTTCTGCTACGACAGATGACCGCGGCGAAGGTGAGGATGCTGCCCCCACTTCGGGGATCTGCAGGCCCCTATCGGAGATACTGAAGGAGCTTAATAAGAAAGTCCCTGACTCTCTCGTCAAAACCCGTGTCGAGCACGACGGATTCGCCATCCGATACATTCCCTGGCACACTGTCAACCGCATTTTAAACTTACACGCTCCTGAGTGGTCCGGTGAAGTTCGGAACATCTCATACTCTGCCAACGCCAAATCTGTCTCTGTTGTCTACCGCGTTACCCTCTATGGCACTGATGCTGAGATATTTAGAGAATCAACTGGTACTGCTTCAATAGATGACACAAGTTATGGAGATCCTGTACAGAAGGCAGAAGCAATGGCTTTTCGCAGAGCTTGTGCACGCTTTGGCCTAGGGCTCCACCTTTATCACGAAGATGTATCATGA 549 0.5009 MRTANLKYLCRRVLPGWTWKVEGSGYRLYSKASSASSATTDDRGEGEDAAPTSGICRPLSEILKELNKKVPDSLVKTRVEHDGFAIRYIPWHTVNRILNLHAPEWSGEVRNISYSANAKSVSVVYRVTLYGTDAEIFRESTGTASIDDTSYGDPVQKAEAMAFRRACARFGLGLHLYHEDVS* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1643 182 PANTHER - 32 181 IPR037489 GO:0000724|GO:0003677
Amo13g1643 182 Pfam Rad52/22 family double-strand break repair protein 60 180 IPR041247 -
Amo13g1643 182 Gene3D DNA repair protein Rad52/59/22 57 182 IPR042525 -
Amo13g1643 182 PANTHER DNA REPAIR RAD52-LIKE PROTEIN 1, MITOCHONDRIAL 32 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1643 Amo-Chr13 22564972 22566833 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1643 - - adu:107477634 353.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1643 13 22564972 22566833 Amo13g1643 13 22564972 22566833 ECH