Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1642 ATGTCAATAATGAGGGAAGTGAGAGGTGGTAGTTGGAAATACAGTGGTGCTAGTGTAAGAAGTTCTGCCGCAGTGGCAGTTGTGGTGCTGTTATGGTGGCATGGAGTGGCACAAGTGAAGTCACAAAGGATTCCAGCTCTGTTTATTTTTGGAGATTCGTTGGTTGAAGTTGGCAACAATAACTTCCTCAGGACTCTTTTAAGGGCTAATTTCTATCCCTACGGCATTGACTATTCCAAGGGTCCCACTGGACGTTTCTCTAATGGCAGATCCTTAATTGACTTCCTTGCGAATCTGTTGGGTGTTCCTTCTCCTCCACCCTTTGCAGATCCTACCACAACTGGTCGTGCAATAATTAATGGAGTCAATTTTGCATCAGCTAACGGTGGCATTCTTGAAGAGTCAGGCAGACACTATGGTGAGAGGTATAGCCTAAGCCAGCAAGTGCTGAACTTTCAGACCACATTAAATCAGCTTAGAACAATGATGGATGCAGACACATTAAGACGGTATTTAGCGAAGTCTATTGTAATTGTAGTCACTGGAAACAATGACTATATCAATAACTACCTCCTTCCTGGCTTATATGGTTCTAGCTCTAATTACACTACTCAACAGTTTGGTAATCTTCTCGTTAATTCCCATATTCAAAATATGCTGGCTTTATATAGCTTAGGACTAAGGAAGTTCTTCTTAGCGGGAGTTGGACCACTTGGTTGCACTCCTAACCAACGAGCTCGCGGTTTAGCCCCATCCGGAAGGTGCTTAGACATTGTTAATCAAATGGTTGGAACCTTCAACCAAGGGCTAAGATCAATGGTGGATCAGTTGAATAGAAACCGTCCTGATTCCATGTTTGTGTATGGTAACACTTACGGCATCTTTGGGGACATGTTAAATAACCCTGCAGCTTATTCATTTAGTGTCATTGACAGAGCTTGTTGTGGACTTGGAATGTATCAAGGCCAAATAACATGTCTCCCTCTTCTAGCTCCATGTGTGTCAAGAAATCAGTATTTGTATTGGGATGCCTTCAATCCATCACAATCTGCAGTGTATGTCTATGCTTGGAGAGTTGTGAATGGTCCTGTTAATGATGCTTATCCTATTAATTTGCAACAAATGGCTCAACTTTAG 1137 0.423 MSIMREVRGGSWKYSGASVRSSAAVAVVVLLWWHGVAQVKSQRIPALFIFGDSLVEVGNNNFLRTLLRANFYPYGIDYSKGPTGRFSNGRSLIDFLANLLGVPSPPPFADPTTTGRAIINGVNFASANGGILEESGRHYGERYSLSQQVLNFQTTLNQLRTMMDADTLRRYLAKSIVIVVTGNNDYINNYLLPGLYGSSSNYTTQQFGNLLVNSHIQNMLALYSLGLRKFFLAGVGPLGCTPNQRARGLAPSGRCLDIVNQMVGTFNQGLRSMVDQLNRNRPDSMFVYGNTYGIFGDMLNNPAAYSFSVIDRACCGLGMYQGQITCLPLLAPCVSRNQYLYWDAFNPSQSAVYVYAWRVVNGPVNDAYPINLQQMAQL* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1642 378 Pfam GDSL-like Lipase/Acylhydrolase 47 351 IPR001087 GO:0016788
Amo13g1642 378 Gene3D SGNH hydrolase 34 362 IPR036514 -
Amo13g1642 378 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 25 377 - -
Amo13g1642 378 CDD SGNH_plant_lipase_like 45 363 IPR035669 -
Amo13g1642 378 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 25 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1642 Amo-Chr13 22562830 22564360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1642 44 375 Acyl Lipid Metabolism Gene Families AT4G10950 36.527 1.07e-67 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1642 - - adu:107477633 746.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1642 13 22562830 22564360 Amo13g1642 13 22562830 22564360 ECH