Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1640 ATGAAAATGGTTCCCACATTACTGCAAAAGTTCATAGAAGTGTTGTTGTGGGCAAGGCAAGTTGTTAGTAGAAAGATGAGGGGGAAACCAGCTTCAGGAAAGGCCATATTTGTTTTATGCATTGCATGCTTCCTTGCTGGAACACTCTTCACAGGTCAAATGTGGACTCGCCCCTCTAACACTGACAATAATAGTAATAATAATAATAATAATAATTTGGTGCCTCTACCCAAACCTCGTGACTGTGACCATAAACGAAAGTTGATTGAAGGCAGAGCTGGTGATGTAATGGAGGAAGTGTCAAAGACCCATCAAGCTATCAAGTCGCTGGACAAAGCAGTTTCAACGTTGGAAATGGAGCTGACAGCAGCTCGGAGAAGTGAAAATAGTGGGGAGCAGTTGAAGAGGCAAGAGGGTGGTTTACAGAAAGCATTTGTGGTGATTGGAATCAACACAGCGTTCAGCAGCAAAAAGAGAAGAGAGTCGATACGGGAAACATGGTTACCGAAAGGAAGCGAGCTTAAGGAACTGGAGAAAGAGAAGGGGATTGTTGTGAGGTTCATGATAGGCCACAGCACCACTGCAGGTGGCATTCTCGATAAAGCAATTGACGCAGAAGAGGCTCAACACAATGATTTCTTGAGGCTCGACCATGTTGAGGGCTACCATGAGCTTTCTACCAAGACTCGCCTCTTTTTCTCCACTGTTGTTTCTTTGTGGGATGCTGATTTCTATGTCAAGGTTGATGATGACATCCATTTAAATCTTGGCATGCTAGTGAGTACCCTTGCTAAGTACAGATCAAGACCTAGGGTTTATATTGGCTGCATGAAATCCGGTCCAGTTCTATATCAAAAAGGGGTAAAGTATCATGAGGCTGAGCACTGGAAGTTTGGAGAAGAAGGGAACAAGCCCATATTACACAGATATGCAAATGAGGACGTCTCTTTAGGGTCATGGTTATTGGGCCTAGAAGTTGAACATATCGATGAACGCTCTATGTGTTGTGGGACACCTCCTGATTGTGATTGGAAGGCAAGGACAGGAAACGTGTGCGTGGCATCTTTTGATTGGTCTTGCAGTGGAATATGTAAATCGGTGGAGAGAATGAAAGATATACACAAAGCTTGTGGGGAAGGAGATGGAGCTGTTTGGAACGTTGACCTCTAA 1170 0.441 MKMVPTLLQKFIEVLLWARQVVSRKMRGKPASGKAIFVLCIACFLAGTLFTGQMWTRPSNTDNNSNNNNNNNLVPLPKPRDCDHKRKLIEGRAGDVMEEVSKTHQAIKSLDKAVSTLEMELTAARRSENSGEQLKRQEGGLQKAFVVIGINTAFSSKKRRESIRETWLPKGSELKELEKEKGIVVRFMIGHSTTAGGILDKAIDAEEAQHNDFLRLDHVEGYHELSTKTRLFFSTVVSLWDADFYVKVDDDIHLNLGMLVSTLAKYRSRPRVYIGCMKSGPVLYQKGVKYHEAEHWKFGEEGNKPILHRYANEDVSLGSWLLGLEVEHIDERSMCCGTPPDCDWKARTGNVCVASFDWSCSGICKSVERMKDIHKACGEGDGAVWNVDL* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1640 389 Gene3D - 134 334 - -
Amo13g1640 389 MobiDBLite consensus disorder prediction 59 75 - -
Amo13g1640 389 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 303 380 IPR002659 GO:0006486|GO:0016020|GO:0016758
Amo13g1640 389 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 30 303 IPR002659 GO:0006486|GO:0016020|GO:0016758
Amo13g1640 389 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE 8-RELATED 303 380 - -
Amo13g1640 389 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE 8-RELATED 30 303 - -
Amo13g1640 389 Coils Coil 107 127 - -
Amo13g1640 389 Pfam Domain of unknown function (DUF4094) 32 126 IPR025298 -
Amo13g1640 389 Pfam Galactosyltransferase 158 299 IPR002659 GO:0006486|GO:0016020|GO:0016758
Amo13g1640 389 MobiDBLite consensus disorder prediction 59 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1640 Amo-Chr13 22447809 22450990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1640 25 389 Glycosyltransferase AT1G77810 56.041 2.21e-159 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1640 K20855 - gmx:100776291 603.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1640 13 22447809 22450990 Amo13g1640 13 22447809 22450990 ECH