Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1627 ATGTGGAGAAAAGTAACCTCCACTTCCTTCTCTTCTCTCAAATCCTCCATCTTCTTCAAACGCCTCCATCTCCAGCAAGCTTCTAAACACAATGCCGCCTCTGCCTCCGCCGTCTCAAGATTTGCCACCATAGCACCCTTGCAGGAAAAGGATGGAAGGTGTCCCTTTATAACATTTGTTTTAGGTGGCCCTGGGAGTGGAAAAGGTACTCAATGTATTAAAATTGTTGAAACCTTTGGATTTAAGCATCTAAGCGCTGGTGATCTTTTGAGAAGGGAGATGGTTTCCAATAGCGAATATGGCTCAATGATTCTGAATACAATTAAAGAAGGAAGGATCGTTCCCTCAGAAGTGACTGTCAAATTGATTCTAAAAGAGATGGAATCTAGTGACAACCATAAGTTCCTTATTGATGGTTTCCCTAGAAGCGAGGAGAACCGCATTGCTTTTGAAAAAATTTCTGGAGCAGAACCAGATGTAGTACTTTTCTTCGATTGTCCAGAAGATGAGATGGTGAAACGAGTATTGAGCCGTAATCAGGGGCGAATAGATGACAATATAGATACAATCAAGAAACGTCTTAAAGTATTTGAAGCATTAAATCTTCCTGTCATTGATTACTATGCAAAGAAAGGGAAAGTTCACAGGATTAATGCAGTTGGAACAGTAGATGAAATATTTGAGCAAGTTAAGCCAGTTTTTAAGGCATGTGAGGTATGTCTTTTGTTGTTATTTCTTTTACATTACATTATCATATTCCTGATAGAATTATGGCTGCTTCATGGTCATGCTTACTACTAG 801 0.3933 MWRKVTSTSFSSLKSSIFFKRLHLQQASKHNAASASAVSRFATIAPLQEKDGRCPFITFVLGGPGSGKGTQCIKIVETFGFKHLSAGDLLRREMVSNSEYGSMILNTIKEGRIVPSEVTVKLILKEMESSDNHKFLIDGFPRSEENRIAFEKISGAEPDVVLFFDCPEDEMVKRVLSRNQGRIDDNIDTIKKRLKVFEALNLPVIDYYAKKGKVHRINAVGTVDEIFEQVKPVFKACEVCLLLLFLLHYIIIFLIELWLLHGHAYY* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1627 266 Gene3D - 53 238 IPR027417 -
Amo13g1627 266 Pfam Adenylate kinase 60 212 - -
Amo13g1627 266 ProSitePatterns Adenylate kinase signature. 135 146 IPR033690 -
Amo13g1627 266 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 235 IPR027417 -
Amo13g1627 266 TIGRFAM UMP_CMP_kin_fam: UMP-CMP kinase family 57 235 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Amo13g1627 266 PANTHER UMP-CMP KINASE 57 242 - -
Amo13g1627 266 PRINTS Adenylate kinase signature 135 151 IPR000850 GO:0005524|GO:0006139|GO:0019205
Amo13g1627 266 PRINTS Adenylate kinase signature 59 72 IPR000850 GO:0005524|GO:0006139|GO:0019205
Amo13g1627 266 PRINTS Adenylate kinase signature 87 101 IPR000850 GO:0005524|GO:0006139|GO:0019205
Amo13g1627 266 PRINTS Adenylate kinase signature 199 213 IPR000850 GO:0005524|GO:0006139|GO:0019205
Amo13g1627 266 PRINTS Adenylate kinase signature 182 197 IPR000850 GO:0005524|GO:0006139|GO:0019205
Amo13g1627 266 PANTHER NUCLEOTIDE KINASE 57 242 IPR000850 GO:0005524|GO:0006139|GO:0019205
Amo13g1627 266 Hamap Adenylate kinase [adk]. 56 235 IPR000850 GO:0005524|GO:0006139|GO:0019205
Amo13g1627 266 CDD ADK 59 226 IPR000850 GO:0005524|GO:0006139|GO:0019205
Amo13g1627 266 Hamap UMP-CMP kinase [CMPK1]. 55 237 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1627 Amo-Chr13 22164510 22167983 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1627 K13800 - gmx:100806842 348.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1627 13 22164510 22167983 Amo13g1627 13 22164510 22167983 ECH