Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1619 ATGGAGGGTATCGAAGATGATGTAGGACATGTTCCTTTGCTAGAAGCTGAAGAAGAAGAAGAAGGAAGGAGACCCTTAAGGTTAAGGGGTAGTTACCTTGGCATATTTGGCTCTACCGTTTTCCTAGTTTCAATGGCTGCACTCATCATATACCAAGGCCATGATTATTATGATGAAGCCAAAATAGAAAACAAGGGTAACAACAACAATAATTACAACAAAGTCCCTAGAGGAGTAGCTGAGGGCGTTTCAGCAAAGTCAAACTCTTTTCTTTCGGAGACTACTCCTTATAATTGGACCAATGCTATGTTATCTTGGCAAAGAACAGCTTTTCATTTTCAACCTGAAAGGAATTGGATGAACGATCCAAACGGTCCATTGTTTCACAAGGGTTGGTACCATCTATTCTACCAATACAATCCCTTTTCAGCGGTGTGGGGTAACATCACATGGGGCCACGCAGTATCAAGGGACCTCATTCACTGGCTCTACCTTCCAGAAGCCATTGTCAGAGACATGTGGTTCGACATCAACGGTGCATGGTCAGGCTCAGCAACGCTCTTGCCAGGTGGCGAAATCGTGATGCTCTACACCGGCTACACCGACCAACAAGTGCAGGTTCAAAATCTCGCATACCCCGCCGACGCATCTGATCCCCTCCTCCTCAATTGGGTCAAATACGCCAAAAACCCCGTCATGGTTCCCCCACCCGGCATCGGCCCACACGATTTTCGCGACCCAACAACGGCCTGGTTCGGCCCAGATAACAAGTGGACGCTCACGCTTGGGTCAATGGTCAATGATTCTGGCCTTTCCTTGGTTTATAAGACAACTGATTTTATTAACTATGAGCTTAATGACCACTTCCTGCATATCGTTCCGGGTACGGGAATGTGGGAGTGTGTTGACTTTTACCCGGTTTCAATAAACGGGTCGGTTGGGTTGGACACGTCAGCAAATGGTCCAGGTGTCAAGCACGTGTTAAAGGCGAGTTTGGATGATACAAAGCTGGACTATTATGCAATTGGGACATATTTTATTGAGAATGACACGTGGATACCCGATGACCCGGATTTGGATGTGGGTATCGGGTTGAGATTGGATTATGGAAAATACTATGCTTCAAAGTCATTTTATGACCAAAATAAACAAAGAAGGGTCCTTTGGGGTTGGATTAATGAATCGGATAGTGAGGTTGCTGATATCACAAAGGGTTGGGCATCTCTTCAGACTATTCCGAGAACAGTATTGTATGACAAGAAGACTGGAACTAATTTGCTTCAATGGCCAGTGGAAGAAATAGAGAGCTTGAGACTTAGCAGTCATGAATTTAAGGAATTATTGGTTAAACCTGGCACAGTAGTGCCATTACACATTGGCCCTGCAACACAGTTGGACATAATTGCTGAATTTGAAATAGAATTGTTGGGATCAGAAGGGATTGTGAATAATGTTGAAGGGTGTGGAGTTGGTGCTGTTGAGAGAAGTGCTTTTGGACCATTTGGCATTTTGGCTATTGCAAATGATCAACTTTCTGAACTAACACCAATTTATTTCCGTCTTTCAAATTATGGAAATGGAACCTCAACTACTACAACAACTACTACTACTTCTACTTCCTTCTGTGTTGATGAAACTAGGTCATCAAAGGCACCTGATGTATCAAAGCAAGTTTTTGGAAGCAAAGTGCCTGTTCTAAATGATGAAAAACTATCACTGAGGGTATTGGTGGATCATTCAATCATCGAGAGTTTTGCACAAGGAGGGAGAACTGTGATCAGTTCTAGAGTTTATCCAACAGAAGCAATCTATGGAGCTGCAAGATTGTTCCTGTTCAACAATGCAACAGACATTAACATCAAGGCCTCCCTTAAGATTTGGCAATTGAACTCTGCTTTTATACGCCCATTTCCCTTTCACAACACTCAATGA 1932 0.4343 MEGIEDDVGHVPLLEAEEEEEGRRPLRLRGSYLGIFGSTVFLVSMAALIIYQGHDYYDEAKIENKGNNNNNYNKVPRGVAEGVSAKSNSFLSETTPYNWTNAMLSWQRTAFHFQPERNWMNDPNGPLFHKGWYHLFYQYNPFSAVWGNITWGHAVSRDLIHWLYLPEAIVRDMWFDINGAWSGSATLLPGGEIVMLYTGYTDQQVQVQNLAYPADASDPLLLNWVKYAKNPVMVPPPGIGPHDFRDPTTAWFGPDNKWTLTLGSMVNDSGLSLVYKTTDFINYELNDHFLHIVPGTGMWECVDFYPVSINGSVGLDTSANGPGVKHVLKASLDDTKLDYYAIGTYFIENDTWIPDDPDLDVGIGLRLDYGKYYASKSFYDQNKQRRVLWGWINESDSEVADITKGWASLQTIPRTVLYDKKTGTNLLQWPVEEIESLRLSSHEFKELLVKPGTVVPLHIGPATQLDIIAEFEIELLGSEGIVNNVEGCGVGAVERSAFGPFGILAIANDQLSELTPIYFRLSNYGNGTSTTTTTTTTSTSFCVDETRSSKAPDVSKQVFGSKVPVLNDEKLSLRVLVDHSIIESFAQGGRTVISSRVYPTEAIYGAARLFLFNNATDINIKASLKIWQLNSAFIRPFPFHNTQ* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1619 643 Gene3D Glycosyl hydrolase domain; family 43 116 441 IPR023296 -
Amo13g1619 643 MobiDBLite consensus disorder prediction 1 20 - -
Amo13g1619 643 Pfam Beta-fructofuranosidase, N-terminal domain 12 104 IPR021792 GO:0004564
Amo13g1619 643 SUPERFAMILY Arabinanase/levansucrase/invertase 105 431 IPR023296 -
Amo13g1619 643 Gene3D - 442 629 - -
Amo13g1619 643 ProSitePatterns Glycosyl hydrolases family 32 active site. 112 125 IPR018053 GO:0004553|GO:0005975
Amo13g1619 643 SMART glyco_32 112 589 IPR001362 GO:0004553|GO:0005975
Amo13g1619 643 SUPERFAMILY Concanavalin A-like lectins/glucanases 430 633 IPR013320 -
Amo13g1619 643 PANTHER ACID BETA-FRUCTOFURANOSIDASE 4, VACUOLAR 61 637 - -
Amo13g1619 643 CDD GH32_Fruct1-like 118 418 - -
Amo13g1619 643 Pfam Glycosyl hydrolases family 32 N-terminal domain 112 430 IPR013148 -
Amo13g1619 643 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 61 637 - -
Amo13g1619 643 Pfam Glycosyl hydrolases family 32 C terminal 433 628 IPR013189 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1619 Amo-Chr13 22014812 22022719 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1619 10 637 Glycoside Hydrolase AT1G12240 57.342 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1619 K01193 - gmx:100814788 953.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1619 13 22014812 22022719 Amo13g1619 13 22014812 22022719 ECH