Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1618 ATGGACTGTTACCCCAAGAGCAGTGACAAGATAACATTGAAGAGGTGGTTTTTCATTGATAAGAGATGGTTCACAAACCTGGATCCCATGGACTTGAAATCAAATCACACCCCTGTTCTTGCTGATGCTGCACCCATAACAAAGTCAAGACTGGGTGTGCATTCAAGTTTATTGCCTTACTCCCCAACCGGGGCGACCTTTCCACATGGTATGCTTTTGACTATCCCAAGGAAGAAAACTGGACTTCTTGAGGATGTTCGTTCTAGTAGTTGGTTGGATGCCATGAAATCATCTTCTCCTCCCCCCAGGAAGATAACGAAGGATGTTAGTCATGGCTTTGCGTCACATGAATCTGATGCTGCTTATTTTAACTGGCTGGTATTGCATACTTTCCTAGAAGTTAAATTCCAGACATTACAAATTGTGGAGGGTACTTATGCTATTTCTCTCTTTCATTTTGTTAATTTCACAGCTAAAATGCGAGATGCTGTTAAAAAGGTGGCTGAATATTTCCCTACTGCTATTATCAGTGGAAGAAGTCGTGACAAGGTATATGAATTTATAGGACTAACAGAACTCTATTATGCTGGTAGTCATGGTATGGACATCATTGGTCCTGTCAGGCAGGCTGTACCTGATAACCACCCTAATTGCACCATTAGGTCTACTGACAAGCAGGGTAAGGAAGTTAATTTATTCCAACCTGCTGCTGAGTTCTTGCCCCTGATTGATGAGGTGTTTGAGTCTCTTGTTGAGAGTACGAAAGATATTAAAGGAGCAAAAGTTGAAAACAATAAATTTTGTGTGTCTGTACATTACCGCAATGTAGATGATAAGAGTTGGGATTTGGTGGGGCAGATTGTCCATGATATTCTGAAGGGCTATCCACGTTTGCGACTAACTCATGGGCGCAAGGTCTTAGAGGTCCGCCCAGTGATTGACTGGGATAAGGGAAAAGCAGTCACGTTTTTGCTCGAGTCACTTGGGCTTAGCAATTGTGATGATGTGCTTCCTATATATATTGGAGATGACAGAACAGATGAAGATGCATTTAAGGTTCTGAGGGAGGGAAATAAAGGTTATGGGATCTTAGTGTCCTCAGCGCCAAAAGAAAGCAATGCAGTTTACTCTCTCCGTGATCCATCAGAGGTACTTCTTATATTCTTCGTGATGTTCTGCTGCTGCACTTGTTTTGCTTGCAAATGCTGTCTTGGATCTTGA 1221 0.4226 MDCYPKSSDKITLKRWFFIDKRWFTNLDPMDLKSNHTPVLADAAPITKSRLGVHSSLLPYSPTGATFPHGMLLTIPRKKTGLLEDVRSSSWLDAMKSSSPPPRKITKDVSHGFASHESDAAYFNWLVLHTFLEVKFQTLQIVEGTYAISLFHFVNFTAKMRDAVKKVAEYFPTAIISGRSRDKVYEFIGLTELYYAGSHGMDIIGPVRQAVPDNHPNCTIRSTDKQGKEVNLFQPAAEFLPLIDEVFESLVESTKDIKGAKVENNKFCVSVHYRNVDDKSWDLVGQIVHDILKGYPRLRLTHGRKVLEVRPVIDWDKGKAVTFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNKGYGILVSSAPKESNAVYSLRDPSEVLLIFFVMFCCCTCFACKCCLGS* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1618 406 SUPERFAMILY HAD-like 156 388 IPR036412 -
Amo13g1618 406 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 30 386 - -
Amo13g1618 406 Pfam Trehalose-phosphatase 156 382 IPR003337 GO:0003824|GO:0005992
Amo13g1618 406 TIGRFAM T6PP: trehalose-phosphatase 157 388 IPR003337 GO:0003824|GO:0005992
Amo13g1618 406 Gene3D - 156 378 IPR023214 -
Amo13g1618 406 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 30 386 IPR044651 GO:0004805|GO:0005992
Amo13g1618 406 Gene3D - 221 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1618 Amo-Chr13 21999741 22003864 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1618 K01087 - gmx:100819495 572.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1618 13 21999741 22003864 Amo13g1618 13 21999741 22003864 ECH