Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1609 ATGTCGAAGGACAAGGACTCTACCAATTTGTCACGCACCTTCAAATACCTCTTAGCTACTCAATTCTTGTCAAGAGGAATTCCATTTATATTCAATACATGGATTGTAAGGCATCTTACACAAGAGGACTATGCGCTATATGCAGTGCAGTTTCATCTGTTTATCACATGTGTTTTATTTCTTAGTCGGGAAGGCTTCCGGCGAGCATGCTTGCGCATGGAAATGCAAAGTGATGGCAATACAAAAGATGTTGTGAAGCTAATGAAAGTGGTGTGGATGAGTTTCCCGCTTGGAATATTTATTACAATAGTGGCATGCTCTTTTGTTCTATGGTTGCAAGGCCTAAGTTATTCTAGTTCACTTGGGCAAGCTGTCTTGATAAATGGTCTTGCATGCATTTTGGAGCTTTTAGCTGAGCCTTTGTATATTCTTTCACAGAACTTGGTCTTGCTTGAATTAAGATTGATGGTTGAGACAGTAGCTACTATTTCACGATGCTTGACAATGTACTTTCTACTTGTCAAGAAATCTCAAATGGAAAAACCAATCATATTTGCATTATCACAATCTGCGTATGGAGCCTGCTTATTTATTGGTTACTGGGGTTATCTCATTCTATTCAGCAAATTCAAATGTTCTTACCTTTTCCCATTCAGAGAAGGAAAACTGATTGACTTTGATAAGCAGCTGTCCAAGATGTGCATGTTGTTTACCTTTCAATCTTATCAAAAGTTGATTCTTCAGGAAGGAGAAAAAATGGTGCTTGTGTGGTTGGATACACCATATAATCAAGCAGTGTATGGTCTTGTGGACAAATTAGGTAGCTTAGTGGTGAGACTAGTCTTTTTACCTTTTGAAGAAAGTTCATATGTAACCTTTGCAAGGTCTGCTTCAGGACAATATCCAGGGAAGAGCAAGAAATTAGGAAACTGCTTGATGGAGTCCCTCAAGTTAGTTTTGTTGATTGGCCTTGTCTTTATGGCATTTGGTCCAAGTTATTCTTATTCGCTCATTAGATTGCTGTATGGTGAAAAATGGAGTGATGGGGAAGCGTCAACTGCTCTCCGCTACTACTGCCTTTATGTCATTGTCTTGGCTATCAATGGAACATCTGAAGCCTTCTTGCATTCAGTTGCAACAGAGAGCCAACTAAAGCGTTCAAATCATTCATTAGTTGTATTCTCGGTGATCTATGTAGTTTTGAATGTCCTGCTAATAAGAATAGCTGGGGCAGTTGGCTTAATTATGGCAAATTCTCTCAGTATCCTTCATACCTTTGGGTTGCTGGCTTAG 1293 0.3921 MSKDKDSTNLSRTFKYLLATQFLSRGIPFIFNTWIVRHLTQEDYALYAVQFHLFITCVLFLSREGFRRACLRMEMQSDGNTKDVVKLMKVVWMSFPLGIFITIVACSFVLWLQGLSYSSSLGQAVLINGLACILELLAEPLYILSQNLVLLELRLMVETVATISRCLTMYFLLVKKSQMEKPIIFALSQSAYGACLFIGYWGYLILFSKFKCSYLFPFREGKLIDFDKQLSKMCMLFTFQSYQKLILQEGEKMVLVWLDTPYNQAVYGLVDKLGSLVVRLVFLPFEESSYVTFARSASGQYPGKSKKLGNCLMESLKLVLLIGLVFMAFGPSYSYSLIRLLYGEKWSDGEASTALRYYCLYVIVLAINGTSEAFLHSVATESQLKRSNHSLVVFSVIYVVLNVLLIRIAGAVGLIMANSLSILHTFGLLA* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1609 430 Pfam Rft protein 13 420 IPR007594 GO:0006488|GO:0016021
Amo13g1609 430 PANTHER ENDOPLASMIC RETICULUM MULTISPAN TRANSMEMBRANE PROTEIN-RELATED 4 422 IPR007594 GO:0006488|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1609 Amo-Chr13 21805045 21813192 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1609 K06316 - gmx:100817452 726.087